Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01066 ATGGGTGTTGTTACTCAGGAATATGCTACTCCTGTTGCTGTGCCTCCTGCGAGGCTCTTCAAAGCCATGTGTTTAGATTTTCACAATCTCATCCCCAAGATCGTCGAATCCATTCAAAGTATTGAATTCACTCACGGTGATGGAGGTGCTGGAACCATCAAGAAGCTCACCATCCTTGAAGGTGGGGAAAGCAAGTATATTCTTCACAGAGTGGATGAAATTGATGCTGAAAAGTTTGTGTACAACTTCAGCATAATTGGGGGAACAGGGTTGGTTGAGACATTGGAGAAGGTCCAATTTGAGAGCCAAATGGTGGAAGCACCCAATGGAGGGTCCCTTAGGAAGGTTCATATTCAGTTCTTCACAAAGGGTGATGCTAAGATGAGTGAACAAGACCTTAAGACTTCTCAAACCAAAGTGGAAGGTGTTGTTAAGCTTGTTGAGGCTTTCCTTTTGGCTAATCCTGATTATTAA 474 0.4346 MGVVTQEYATPVAVPPARLFKAMCLDFHNLIPKIVESIQSIEFTHGDGGAGTIKKLTILEGGESKYILHRVDEIDAEKFVYNFSIIGGTGLVETLEKVQFESQMVEAPNGGSLRKVHIQFFTKGDAKMSEQDLKTSQTKVEGVVKLVEAFLLANPDY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01066 157 CDD Bet_v1-like 2 151 - -
Aip04g01066 157 Gene3D - 2 157 IPR023393 -
Aip04g01066 157 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01066 157 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01066 157 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01066 157 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01066 157 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01066 157 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01066 157 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip04g01066 157 PANTHER PATHOGENESIS-RELATED PROTEIN 10 1 157 - -
Aip04g01066 157 Pfam Pathogenesis-related protein Bet v 1 family 2 154 IPR000916 GO:0006952
Aip04g01066 157 PANTHER - 1 157 - -
Aip04g01066 157 SUPERFAMILY Bet v1-like 2 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01066 Aip-Chr4 15569088 15570481 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01066 - - gmx:100810115 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01066 04 15569088 15570481 Aip04g01066 04 15569088 15570481 ECH