Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01041 ATGAAGAAGATGAACAATAACAAGATTCCAACAACATCATGGGTTTTGATGTTGTTGTTTGTTTTTGGAACAACGTTGGTGTGTGTGGTTAATGCACAATCATCGGTGAAGCCGGTGGTGAAGATAGTGAAGGGGAAAAAGCTTTGTGACAAAGGGTGGGAGTGTAAGGGTTTCTCTGCTTATTGTTGTAACGAGACAATCTCTGATTTCTTCCAAACTTACCAGTTTGAGAACCTCTTTGCAAAGAGGAATTCCCCGGTGGCGCATGCCGTCGGTTTCTGGGATTACCAGTCATTCATCACGGCCGCCGCGCTGTACCAGCCTCTTGGGTTCGGGACCACCGGTGGAAAGCTTGGTGGCATGAAGGAGGTTGCTGCTTTTCTTGGTCATGTGGGAAGCAAGACTTCTTGTGGATATGGGGTGGCAACAGGGGGACCCTTAGCATGGGGATTATGTTACAACAAGGAACTGAGTCCAGATAAATATTACTGTGATGACTACTACAAGTTGACCTATCCATGCACCCCTGGCGCCGCTTATTATGGCCGTGGCGCCATCCCTATTTACTGGAACTACAACTATGGAAAAATAGGAGAAGCCCTAAAGGTGAATCTATTGGACCACCCAGAATACATAGAGCAAAATGCCACGCTGGCATTCCAAGCAGCAATACACACGTGGATGACCCCACCAGACAAGCACATTCCTTCACCACACGATGCCTTTCATGCCAACTGGAAGCCAACTAAGAATGACACGTTGGCAAAGCGGGTCCCAGGTTTTGGTGCCACAATCAATGTTCTCTACGGTGACCAAGTTTGTGGCCAGGGTTCTGATGGTGATGACATGAACAACGTTATTTCTCATTACCTCTATTATCTTGATCTCATGGGTGTTGGCCGAGAAGAAGCTGGGCCCCATGATGTCCTCTCTTGTGCTGAGCAAAAGCCCTTTAAGTCCGCTGGGCCTCCATCTTCTTCAACAACTTGA 990 0.4768 MKKMNNNKIPTTSWVLMLLFVFGTTLVCVVNAQSSVKPVVKIVKGKKLCDKGWECKGFSAYCCNETISDFFQTYQFENLFAKRNSPVAHAVGFWDYQSFITAAALYQPLGFGTTGGKLGGMKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKELSPDKYYCDDYYKLTYPCTPGAAYYGRGAIPIYWNYNYGKIGEALKVNLLDHPEYIEQNATLAFQAAIHTWMTPPDKHIPSPHDAFHANWKPTKNDTLAKRVPGFGATINVLYGDQVCGQGSDGDDMNNVISHYLYYLDLMGVGREEAGPHDVLSCAEQKPFKSAGPPSSSTT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01041 329 PANTHER CHITINASE-RELATED 21 322 - -
Aip04g01041 329 Pfam Chitinase class I 75 302 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aip04g01041 329 Gene3D - 75 318 - -
Aip04g01041 329 PIRSF Endochitinase 4 319 IPR016283 GO:0004568|GO:0005975
Aip04g01041 329 Gene3D Endochitinase, domain 2 155 214 - -
Aip04g01041 329 PANTHER CHITINASE-LIKE PROTEIN 1 21 322 - -
Aip04g01041 329 CDD chitinase_GH19 75 312 - -
Aip04g01041 329 SUPERFAMILY Lysozyme-like 67 318 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01041 Aip-Chr4 15047996 15049851 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01041 32 318 Glycoside Hydrolase AT3G16920 81.533 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01041 - - gmx:100805300 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01041 04 15047996 15049851 Aip04g01041 04 15047996 15049851 ECH