Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01032 ATGTCTTCGTTCTCATGGGTTACTGCTCTATTGCTTCTTCTATACACAGCTAACCTTCGCTTGGCAGATGCTCAAATTGGTGTTTGCTATGGTATGCTGGGGAACAATCTACCAGCAGCAAACGAAGTGATAGATGTTTACAGATCAAACAACATCAAACGAATGAGACTCTATGATCCCAATCAAGCTGCTCTACAAGCACTTAGAAACTCCGGCATTGAACTCATTCTTGGAGTTCCAAACTCTGATCTTCAAGGCCTTGCCACAAACTCTGAGAGCGCACGCCAATGGGTGCAAAGAAATGTGCTAAGCTTTTGGCCTAGTGTCAAAATCAAGTACATTGCAGTTGGTAATGAAGTGAGACCTGTTGGAGACTCCACTTCATGGATGGCTCAGTATGTTCTCCCAGCAATTCAGCtggtgcacaaaattgtgatcatcaatggcgccaacaacttggtacgcacaattgtaatctcaactctttgtcacaactccgcacaactaaccagcaagtgcactggtcggccaagtaataaaccttacgtgagtaagggtcgatcccacggagattgtcggcttgaagcaagctatggtcatcttgtaaatctcaGTGCACCATTACTAACCAACGTTTATCCTTACTTTAGCTATAAAGATAACCCACGTGACATATCACTATCCTATGCTATTTTCACATCACCAAATGTTGTGGTACAAGATGGTCAATATGGGTACCAGAATCTTTTTGATGCTATGTTAGATGCAGTGCATGCTGCCATTGATAACACTGGAATTGGTTTTGTTGAGGTTGTTGTGTCTGAGAGCGGGTGGCCCTCAAGTGGAGATTTTGGTGCAACTTATGATAGTGCCCAGATTTATTTGGATAATTTGATTCGTCATGTTAATAGGGGTACTCCAAGAAGGTCTTGGAAGCCTACGGAAACTTATTTATTTGCCATGTTTGATGAGAACCAGAAGAATCCAGAGCTAGAAAAACATTTTGGACTTTTCTTTCCTAACAAACAGAAGAAGTATTCATTTGGATTTGGTGCAGAAAGGGGATTGGAATTCTTTAATGCAACAATTCCATTGAAGAGTGACATCTGA 1110 0.3396 MSSFSWVTALLLLLYTANLRLADAQIGVCYGMLGNNLPAANEVIDVYRSNNIKRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNSESARQWVQRNVLSFWPSVKIKYIAVGNEVRPVGDSTSWMAQYVLPAIQLVHKIVIINGANNLVRTIVISTLCHNSAQLTSKCTGRPSNKPYVSKGRSHGDCRLEASYGHLVNLSAPLLTNVYPYFSYKDNPRDISLSYAIFTSPNVVVQDGQYGYQNLFDAMLDAVHAAIDNTGIGFVEVVVSESGWPSSGDFGATYDSAQIYLDNLIRHVNRGTPRRSWKPTETYLFAMFDENQKNPELEKHFGLFFPNKQKKYSFGFGAERGLEFFNATIPLKSDI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01032 369 Pfam Glycosyl hydrolases family 17 26 349 IPR000490 GO:0004553|GO:0005975
Aip04g01032 369 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 17 355 - -
Aip04g01032 369 SUPERFAMILY (Trans)glycosidases 26 349 IPR017853 -
Aip04g01032 369 Gene3D Glycosidases 25 351 - -
Aip04g01032 369 ProSitePatterns Glycosyl hydrolases family 17 signature. 269 282 IPR000490 GO:0004553|GO:0005975
Aip04g01032 369 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 355 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01032 Aip-Chr4 14778520 14808799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01032 32 354 Glycoside Hydrolase AT4G16260 54.128 5.03e-111 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01032 - - ccaj:109791097 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01032 04 14778520 14808799 Aip04g01032 04 14778520 14808799 ECH