Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01031 ATGGCTTCTCTGTTACTCATGTTGGCATTATTCGCAGTAAATCTTCGCATTACTGGAGCTCAAATTGGTGTATGTTACGGGATGATGGGCAACAACCTACCATCACCACAAGAAGTGATAGAGCTTTGCAAAGCAAACAACATTGTGAGAATGAGGCTCTACGATCCAAACCAAGCAGCTCTCGAAGCACTTAGAAACAGCGGCATTGAGGTCATGTTGGACGTTCCAAATTCCGACCTTCAAAGCCTGGCCAACCCAAACAACGCTGGCCAATGGGTTCAAACAAACGTCCTCAACTTCTATCCAGCTGTCAACATCAAATACATCGCCGTCGGCAACGAAGTCAAACCCGTCGGCGACTCCACTTCATGGATGGCTCAGTACGTTCTCCCAGCAATCCAAAACGTGTATCAAGCCATAAGAGCTAAAGGCCTTCATGATCAAATCAAGGTTTCAACCGCCATCGACATGACCCTTATAGGAACCTCTTATCCCCCATCAAAGGGTTCATTTCGAAGCGATGTAAGGTCCTACTTGGACCCCATAATCGGCTACTTAGTCTATGCAAATTTGCCACTTTTCGCAAATGTGTACCCTTATTTTAGCTACGTTGGAGACCCCAATGATATATCACTGCCTTACGCTTTGTTTACTGCACCGAATGTTGTTGTCTGGGATGGATCAAGAGGGTACCAAAACCTGTTTGATGCAGTTTTGGACTCTGTTCATGCGGCTCTTGATAACACCGGGATTGGATACGTGAAAGTGGTTGTGTCTGAGAGTGGATGGCCTTCGGATGGTGGATTTGCGGCAACATATGACAATGCAAGAGTTTATTTGGGAAATTTGATTCAACATGTGAAGGGTGGTACCCCAATGAGGCCTAATGTGGCTATAGAGACTTACCTGTTTGGGATGTTTGATGAGAACCAAAAGAGCCCTGAAGTGGAGAAACATTTCGGTGTCTTCTATCCAAACAACCAAAAGAAGTATCCATTTAATTTTGGATTTAGTGCAGCAAGACACTGGGAGGATGACATTGTTGCTATTAAGAATGCTTCTGTTTCTTTAAGGAGCGACGCCTAA 1086 0.4484 MASLLLMLALFAVNLRITGAQIGVCYGMMGNNLPSPQEVIELCKANNIVRMRLYDPNQAALEALRNSGIEVMLDVPNSDLQSLANPNNAGQWVQTNVLNFYPAVNIKYIAVGNEVKPVGDSTSWMAQYVLPAIQNVYQAIRAKGLHDQIKVSTAIDMTLIGTSYPPSKGSFRSDVRSYLDPIIGYLVYANLPLFANVYPYFSYVGDPNDISLPYALFTAPNVVVWDGSRGYQNLFDAVLDSVHAALDNTGIGYVKVVVSESGWPSDGGFAATYDNARVYLGNLIQHVKGGTPMRPNVAIETYLFGMFDENQKSPEVEKHFGVFYPNNQKKYPFNFGFSAARHWEDDIVAIKNASVSLRSDA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01031 361 Gene3D Glycosidases 21 336 - -
Aip04g01031 361 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 14 342 - -
Aip04g01031 361 Pfam Glycosyl hydrolases family 17 22 335 IPR000490 GO:0004553|GO:0005975
Aip04g01031 361 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 342 IPR044965 GO:0004553|GO:0005975
Aip04g01031 361 SUPERFAMILY (Trans)glycosidases 22 334 IPR017853 -
Aip04g01031 361 ProSitePatterns Glycosyl hydrolases family 17 signature. 254 267 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01031 Aip-Chr4 14770773 14773947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01031 28 341 Glycoside Hydrolase AT4G16260 64.241 3.02e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01031 - - ccaj:109791097 530.791