Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01022 ATGCCACGTAGTAATCATAGGAGACTGGGAGTGGCCATGGATTTCTCGCCGTGCAGCGTCGCGGCGCTCAAATGGGCGGTGGAAAATTTTGCCAGAGAAGGAGACCATATCATCCTCCTCATCATTCGCCCAGACGTTAACTACGAGCATGGCGAGATGCAGCTCTGGGAACTCACCGGAGCTCCTTACATACCCCTAAACGAGTTCACTGATGCTGAGGTCATGAAGAAATATGGACTGAAGCCCACTCCCGAAGCAATTGAAGTGTCCCAAAAAGCTGCAAAGGATAAAAAAGTAGAGGTACTCATGAAAATCTTTTGGGGTGACCCTCGTGAAAAGATTTGCCAAGCAGTCGATTCAATACCTTTAGAGGCTCTTTTCATGGGAAATAGAGGCCTTGGTCCCCTCCAAAGGGCCTTTATGGGAAGTGTGAGTAATTATGTAGTGAATCATGCCACATGTCCAGTCACTGTGGTGAAGAGTGACAATCAAAATAAAAGTTAA 504 0.4702 MPRSNHRRLGVAMDFSPCSVAALKWAVENFAREGDHIILLIIRPDVNYEHGEMQLWELTGAPYIPLNEFTDAEVMKKYGLKPTPEAIEVSQKAAKDKKVEVLMKIFWGDPREKICQAVDSIPLEALFMGNRGLGPLQRAFMGSVSNYVVNHATCPVTVVKSDNQNKS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01022 167 CDD USP_Like 8 159 - -
Aip04g01022 167 PRINTS Universal stress protein signature 6 24 IPR006015 -
Aip04g01022 167 PRINTS Universal stress protein signature 120 132 IPR006015 -
Aip04g01022 167 PRINTS Universal stress protein signature 138 160 IPR006015 -
Aip04g01022 167 PANTHER IMP2'P 6 165 - -
Aip04g01022 167 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 162 - -
Aip04g01022 167 Pfam Universal stress protein family 7 160 IPR006016 -
Aip04g01022 167 Gene3D HUPs 3 167 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01022 Aip-Chr4 14655510 14656906 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01022 - - adu:107483438 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01022 04 14655510 14656906 Aip04g01022 04 14655510 14656906 ECH