Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01010 ATGACAATCACAAACTCTTTTACTTGTCCTCTTATTATCTTCCTCTGCTTCATCACAATAATCCCCCTTGTGCTTTGTGATGATGTTGGAAAAATAATGCATTATTCAGGTCGTCATTCACCCCAGATTCTTCTTTCTTTCCATCAACCAAAAAATGGTTCAAGGCTTCCACATCCCATTTCAAGAAAATTCATGTTTCATGGTTCTTGCACAAGCAAAGACATAAGCATATCACAAAGCAAATATTCAACATCTGGAATCCCAGAATACATAGTGCAAATAGTGAACACTTGTGTATCTGGTTGTGCTCCTCATGACATACACCTTCATTGTGGCTGGTTTGCATCTGCAAGAATCATCAACCCAACATTGTTTAAGAGGCTCTCTTATGATGATTGCTTGGTCAATGCTGGCAAATCTTTGGCCTCAACTCAAATCATCAGATTCACTTATTCTAATTCCTTCATGTATCCATTAGTACTCAAGTCTGCTAGATTTTGCTCATGA 507 0.3787 MTITNSFTCPLIIFLCFITIIPLVLCDDVGKIMHYSGRHSPQILLSFHQPKNGSRLPHPISRKFMFHGSCTSKDISISQSKYSTSGIPEYIVQIVNTCVSGCAPHDIHLHCGWFASARIINPTLFKRLSYDDCLVNAGKSLASTQIIRFTYSNSFMYPLVLKSARFCS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01010 168 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 27 167 IPR040361 -
Aip04g01010 168 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE 27 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01010 Aip-Chr4 14295888 14296700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01010 67 151 Glycosyltransferase AT4G32110 34.483 1.42e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01010 - - aip:107636119 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01010 04 14295888 14296700 Aip04g01010 04 14295888 14296700 ECH