Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01008 ATGATCAGTGTCAATGATGATAAAGATCTTCATTTTCGTAAAGCCGAATTTGATCCAGAAGACTGTCCAGCAGATTGTTCTCGCCCTTGCGAAATTGTGTGCCCTGCTAATGCAATATCATTCCTAGGGAAATCAGCATCTGGAACTTCATCTAATACTGAATTACCAAGAATTTTAGTGGATGGAGTCATAACAGAACGCTGCTACGGTTGTGGCCGTTGCCTTCCGGTTTGCCCCTATGACAAAATAAGAGAGGTAACATATGTAAGAGATGCCGCGACAACTGCTGATCTCCTCAGGAGGGATGATGTTGATGCTATGGAGATACATACAAGTGGGAGGCAGAGTGCACAATTCAAAGAGCTCTGGTGTGCTTTAGGGGATTCAGTAGAAAACTTAAAGTTAATAGCAGTTAGCTTACCTAATGGTGGAGCTTCAACAATATCCTCTATGAATGAGATGTTCTCCATTATGAAACCAAATCTTCAATGCTTCAACTTATGGCAGTTGGACGGCCGGCCGATGAGCGGAGACATCGGGAGAGGAGCAACCAAGGAAACAATCGCCTTTGCTATCGAATTGGCAAAAGCGATAAACCGACCTCCCGGTTTCCTTCAACTTGCTGGTGGCACTAATGCTCACACAATTGATGGATTGAGAAAAAAAGGACTATTTCAAACAACATCTATTGCAGTTGATTCGTCGAATTCGGCAGACGCCTTAATCGGCGGTATAGCTTACGGAGGCTATGCACGGAAGATTGTTGGTAGAGTATTGAGATCAATGCAATCTGAATATGGGGGAGCTGCTAGAATAGAGGATCATCCTCAACATCTTTTGATGGCTCTTAAGGAAGCACTTGCTTTAGTTGGACCTGTTAAATGTTCATGA 891 0.4343 MISVNDDKDLHFRKAEFDPEDCPADCSRPCEIVCPANAISFLGKSASGTSSNTELPRILVDGVITERCYGCGRCLPVCPYDKIREVTYVRDAATTADLLRRDDVDAMEIHTSGRQSAQFKELWCALGDSVENLKLIAVSLPNGGASTISSMNEMFSIMKPNLQCFNLWQLDGRPMSGDIGRGATKETIAFAIELAKAINRPPGFLQLAGGTNAHTIDGLRKKGLFQTTSIAVDSSNSADALIGGIAYGGYARKIVGRVLRSMQSEYGGAARIEDHPQHLLMALKEALALVGPVKCS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01008 296 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 291 IPR013283 -
Aip04g01008 296 Pfam Iron-Sulfur binding protein C terminal 98 291 IPR021039 -
Aip04g01008 296 SUPERFAMILY 4Fe-4S ferredoxins 9 92 - -
Aip04g01008 296 Gene3D - 15 98 - -
Aip04g01008 296 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 13 44 IPR017896 -
Aip04g01008 296 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 IPR017900 -
Aip04g01008 296 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 56 88 IPR017896 -
Aip04g01008 296 PANTHER ATP-BINDING CASSETTE SUB-FAMILY E MEMBER 1 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01008 Aip-Chr4 14277076 14279943 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01008 - - aip:107638977 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01008 04 14277076 14279943 Aip04g01008 04 14277076 14279943 ECH