Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00982 ATGGAATTTGAAGCACACGCTCCTTCTTCTCCTCCTCCTTCTCCTCCTCCTTCTTATTCTTATTCATTAAGCGGCGTCGTTTTGGACCCTCCTATTCATCCTCCACCCCCGACGCTGCCGCCGCCACCTCCACCGCCGTTTCTGCGTATTGATCCTTCTTCGGGGGTGCTTGTTCCACCCCCGCAACCTTTCCCTTTCAACCTTTCTCTCATCTTCTCAATGGATCACCAGAGGTCTATGTCCCTTCTTCAGTTTATGGCTGATGAAGGACTTGTTCCTTCTGTGGAAGAGGAAGAGAGAAGGAAGAATGCTATTCAGAAGCTCAAACAGATTGTGTCAACATGGATCAAGCAGGTTGCTGTACAACGGCGATTACCAAAGCATCAGATTGCAGCTACATCTGCCACGGTATTGACATATGGATCTTATGGCCTAGGAGTTCACAGTGCTGACTCTGACATTGATGCTTTGTGTGTTGCTCCTTATTTTGCAACCCTTTCGGAAGACTTCTTTGTTGTTTTGCACGACATGCTTAAAAGTAGGCCAGAAGTGTCGGAGCTTTACTGTGTCAAGAGTGCAAAAGTCCCTCTGATGCGATTCAAATTCGATGGAATTTCCATTGATCTTCCATATGCTTGCTTGAAAGTACTATACGTTCCTGAGAGTGTTGACATACTACACCCATTCTTCTTGAGGAATATTGATGACACCAGCTGGAAAAGCTTGTCTGGTGTACGAGCAAATAAACGTATTCTTCAGCTAGTACCAAATGTTGAGAATTTTCAAGCTATGGTACGGTGTCTTAAATTATGGGCAAAAAGGCGAGGAGTTTATGGCACATTACATGGTTACTTGGGAGGAGTCCATTTGGCAATTCTTGCAGCTTATGTTTGTCAACGGCATCCTGATGCCTCCATAAATGCTTTGATTATGAACTTTTTCCGAACATTTGCCTTTTGGTCCTGGCCTTCGCCAGTGACGCTGCAGGAAGGAATGTTCCTAAAACAACTAGAGAGCATGGAAATGCGATCTTTCATGCCTATTTTGCTGCCATCTAGCCCTTATGAATTTTGCCATTCAAATATAACCAAAAGCACTTTCTACCGGATCAGGACAGAGTTTGTACGTGGATACAATATGACAAGGGATCTTTTGAAGCCAGGTTTCACGTGGGACAATATATTTGAGCTTTTTCCATACTCAAGAAGGTACTCCAAATTTGTCAAGATTTACCTATCTACTACCAATCAATGTGAGCTTGGCGACTGGGTTGGTTGGGTCAAGTCACGCTTCCGCAGTCTTCTCATCATTCTTGAGGGGATCCAGGGTTTTTGTGATCCTAACCCTACGGAGTACACTGACCCTGACAAAAGCGAGCCAAACATGGTTTTCTACTGGGGCTTGCAATCCGGAAGGAACAACTACCTGGACATAGAGTTGGTGGAGGGAGAGTTCATGAAGGTCATCAGAAACGGCTGCGAGGGAACTCCCGGTAGGTTGGAGTTGCACCTCCTATCGCCTTCGCAGCTCCCCAAGAATGCCCAGTTTGATGATAGAAGTATAATTATTAATAACAAAGGTAGAAAAGCATGCTGGAAAATGGTTGGTTGTGACAAGAAAAGGAGCCAAGTTTATCCACAGCATCATATTCAACATTGCCTTGTTGGTCATGTCTCATCTAATGGGGAGGGTGAATGCTTAAGTTCTAGTGGCTAG 1716 0.4487 MEFEAHAPSSPPPSPPPSYSYSLSGVVLDPPIHPPPPTLPPPPPPPFLRIDPSSGVLVPPPQPFPFNLSLIFSMDHQRSMSLLQFMADEGLVPSVEEEERRKNAIQKLKQIVSTWIKQVAVQRRLPKHQIAATSATVLTYGSYGLGVHSADSDIDALCVAPYFATLSEDFFVVLHDMLKSRPEVSELYCVKSAKVPLMRFKFDGISIDLPYACLKVLYVPESVDILHPFFLRNIDDTSWKSLSGVRANKRILQLVPNVENFQAMVRCLKLWAKRRGVYGTLHGYLGGVHLAILAAYVCQRHPDASINALIMNFFRTFAFWSWPSPVTLQEGMFLKQLESMEMRSFMPILLPSSPYEFCHSNITKSTFYRIRTEFVRGYNMTRDLLKPGFTWDNIFELFPYSRRYSKFVKIYLSTTNQCELGDWVGWVKSRFRSLLIILEGIQGFCDPNPTEYTDPDKSEPNMVFYWGLQSGRNNYLDIELVEGEFMKVIRNGCEGTPGRLELHLLSPSQLPKNAQFDDRSIIINNKGRKACWKMVGCDKKRSQVYPQHHIQHCLVGHVSSNGEGECLSSSG 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00982 571 SUPERFAMILY Nucleotidyltransferase 62 252 IPR043519 -
Aip04g00982 571 SUPERFAMILY PAP/OAS1 substrate-binding domain 256 396 - -
Aip04g00982 571 Gene3D - 73 395 - -
Aip04g00982 571 Pfam Poly(A) polymerase central domain 73 396 IPR007012 GO:0004652|GO:0043631
Aip04g00982 571 CDD NT_PAP_TUTase 100 214 - -
Aip04g00982 571 Gene3D Poly(A) polymerase predicted RNA binding domain 400 497 - -
Aip04g00982 571 PANTHER NUCLEAR POLY(A) POLYMERASE 3 66 562 - -
Aip04g00982 571 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 399 492 IPR011068 GO:0003723|GO:0016779|GO:0031123
Aip04g00982 571 PANTHER POLY A POLYMERASE 66 562 - -
Aip04g00982 571 MobiDBLite consensus disorder prediction 29 54 - -
Aip04g00982 571 MobiDBLite consensus disorder prediction 1 54 - -
Aip04g00982 571 Gene3D Beta Polymerase, domain 2 93 249 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00982 Aip-Chr4 13833696 13837447 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00982 K14376 - qsu:112002927 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00982 04 13833696 13837447 Aip04g00982 04 13833696 13837447 ECH