Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00973 ATGATTCACAACACCCTTACACTCATTCACAACACCAATCACCATTTCTTCATCTCCGCAAATGGGTACCCTTCCTTTTCTTCTTCTTTTCTACCATTTTCAATTCGAACCAAGCCCAGAAGAAAATCTACATCACTGGTTGTGAGTGCCCACAAGAAAGAGAATAAAGACGACAGCCATAGCTTTGTTTCCAACCCCAGCGAGTCCACTGGCTTCTTCCCAGAAGCAGTACTCCTTAAAAAAAAATCAATCCAGGAAGATGGCAAGGTTCTGCCGGAGTTCGAAGATGCTGAAGAAAGACAACTTTTTGAAGCGCTTATGCTTGAGCTGGATAGCGATACGAGTGTTGATCAAATGCGCCATTATGAGATTGTTTACTTGATTCATGAAAAGCACAACGAACAAGTTGCAGCTGTCAACGAGAAAATTCAAGACTTTTTGAGGGAAAAGAAAGGCACAGTGTGGAGATTTAGTGATTGGGGTATGAGAAGGCTGGCTTACAAAATAAAGAAAGCTAAAAATGCACACTACATTTTGATGAACTTTGAGTTGGACGCGAAATATATCAACGAGTTCAAGACAATGTTGGACCAAGATGAAAGAGTTATTAGGCATCTTGTGATCAAGAGGGACGAGGCGATCACTGAAGATTGTCCTCCTCCTCCCGAGTTCCATACTCTGCGCGCCGGTGCAGATGATGATTATGATGATGAAGGATATGAAACAGAATATGATGAGGATTTCGATGATGATTGGGATGGTGAAGATGATGATGATGGCGAAATTATCATTGTGGATGATGATGATGATTATGATGATGATGATGGTAGAGATCATAGAAATGATACATCAGCAAATATGATTCAGCCAGATAGAAAATTGAGGGCTGGGAACGTAGCTAGGGCCATAAAGAGCACGGTGAGAGGATTTTCAAGGCCATTGCTGAATATAAGCTCAGCAATATTTGGACAAATAATAAATAATGCCTTTGGTAAAAGGCTGGAGCCACCATTTGATCCCTATGCTAATGACATAAACTATTTAATTGCATCTTATGTGATTCCTTATGTTGGTCTGAATGGCTATGTTGGTGCCAACCCGCTTCTGCAAAGTGCCACTGCCAAAGCGCTTGTTGCAGGACTATTAGGTGTGGAGTCTGGTCAAGACGCAATAATCCGAGGTTTGTTATACGAACGGCGAGATGAGATAGTAATCCCATATAAAGTGAGTGTGACTGAGTTCACAAATCGCATCTCAAACCTTAGAAACAAATTAGGGAGGGAAGGTATTAAAGATGAAGGTCTTGTGGTACCTAAAGAGCTTGGTGCTGAAGGAGAAGTCACAGGGAATATTCTTTCAGCCAACGATTATTCACTTTCATATCCTAGAACTCCAAAAGAGATATTGAGAATAGTGTATGGAACAGGTGATGAACATGTTCCTGGTGGATTCTACCCTCTTGGAGCTAATGGTACCATCGCTAAATCTTACTTGGAACGTAATTAA 1506 0.4117 MIHNTLTLIHNTNHHFFISANGYPSFSSSFLPFSIRTKPRRKSTSLVVSAHKKENKDDSHSFVSNPSESTGFFPEAVLLKKKSIQEDGKVLPEFEDAEERQLFEALMLELDSDTSVDQMRHYEIVYLIHEKHNEQVAAVNEKIQDFLREKKGTVWRFSDWGMRRLAYKIKKAKNAHYILMNFELDAKYINEFKTMLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRAGADDDYDDEGYETEYDEDFDDDWDGEDDDDGEIIIVDDDDDYDDDDGRDHRNDTSANMIQPDRKLRAGNVARAIKSTVRGFSRPLLNISSAIFGQIINNAFGKRLEPPFDPYANDINYLIASYVIPYVGLNGYVGANPLLQSATAKALVAGLLGVESGQDAIIRGLLYERRDEIVIPYKVSVTEFTNRISNLRNKLGREGIKDEGLVVPKELGAEGEVTGNILSANDYSLSYPRTPKEILRIVYGTGDEHVPGGFYPLGANGTIAKSYLERN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00973 501 CDD bS6 121 210 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aip04g00973 501 Gene3D - 114 217 IPR014717 -
Aip04g00973 501 PANTHER DESICCATION-LIKE PROTEIN 300 499 - -
Aip04g00973 501 TIGRFAM S6: ribosomal protein bS6 119 211 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aip04g00973 501 MobiDBLite consensus disorder prediction 234 275 - -
Aip04g00973 501 Pfam Ferritin-like domain 301 398 - -
Aip04g00973 501 SUPERFAMILY Ribosomal protein S6 119 219 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aip04g00973 501 PANTHER - 300 499 - -
Aip04g00973 501 Hamap 30S ribosomal protein S6 [rpsF]. 119 212 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aip04g00973 501 MobiDBLite consensus disorder prediction 214 286 - -
Aip04g00973 501 ProSitePatterns Ribosomal protein S6 signature. 161 170 IPR020815 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aip04g00973 501 Pfam Ribosomal protein S6 121 209 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aip04g00973 501 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00973 Aip-Chr4 13603928 13682978 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00973 - - aip:107608729 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00973 04 13603928 13682978 Aip04g00973 04 13603928 13682978 ECH