Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00972 ATGGCTCGGAAGGGTAATCAGCAGAAGAATGGATTGGCAAACAAAAAGGGGGTTTCTGGGGGTGTTCTTCCAAAGGTTTATCCTGGGGAAGGTATGAAAGGTCATGCCAAAGGAGGGACTCAGGTGAAGGTTTATCCTGGGGAAGAATTAGCAAATGGCGACAGCCCGAGCCATTTTTCGCAGAGTGGAAGTGAGGTTGCTTCTGCTTGTGATGACATTAGCAGTGAGCAAAATTATGAGAAGTCTTTGAGGAAAGAGAAGCAAGAGGAATTCGTAAAGCATGATATGGAGGAATCTATGTCTTCAGGGAATGATTCAGGTGGGGGAAGATTGAATCATGATGTGCCAATACAGGAGGAAAATGGGACCTTGCCGGGGAGTGATCTAGGTCAACAGAGTATGAAGAGTAGATTGAGCTGTTTACTTGATGGTTTGAAAGTGAAAAGTTTGGTGGAAAATTCTGAGCTTGCTGATCGTGTGATCATTAGGCGTATAAGGTTGTCGGTGTTATCCATTTTTACAGCAGTTACTGGATGGCTAACCCGGCAGAAGCCACTGTTTTTATCCTTTGCAAATGTCACTCTTAAAACCTGTGATAATCTCAGAATGAAAATTAAGAAGGCGTATCCTGTTTTGTTAAAATGGCTCATGCATCTTGGGAACATAATGCTTCTGTTATCGGTGTTTTGGCTGGATTGTGCGATAAGGGGTTTCGATTCATTTGTACGTATGGGGACAACGTCCTTCTTCTCTGTTATATGGTGCAGCGTATTCTCTGTGATTAGTATGATAGGGATGCTCAAGTTTCTTGTTGTCCTGGGTCTAGCTGCCTTAATTGGATTTTTTGTTGGGCTCACCCTCGCAGTTTTGGTAGTTGCAATCATTGGGGTTGTGTTCTTGTGGTTTTATGGTAGCTTTTGGACCACGACATTTTTCGTCATCCTCGGAGGATTGGCATTTATGTTAAGTCATGAACGTCTGGCACTATTTATCATGACCTCGTATTCTGTCTATTGTGCTTGGTTGTACGTTGGGTGGCTTCGTTTGCTATTGGCTTTTAATTTAGCTTTTATCTCGAGTGATGTGTTGATATACTTCCTCAAGAAAAACATCGAACAACAGAGTAGGTCCAATCCTTTTGAACAAAGAGCTGGCATGCATGCTCAATCAGGTTTCTCTAATGATGAGACAACACAGCCTTCCTCCTCTGAAAATGGGCCTGGACCATTTACTGATCGTAATGCAGGAGACCCTTCAACTAGTGGAGTGGATTCTGATTTGACGTCTGAAGATGAAGTTGTCCGATTGTTGAACTGCTCTGATCACTATTCAGCATTGGGTTTCACGCGGTATCAAAATATAGATGTTTCAGTACTGAAACGGGAATATAGGAAGAAGGCAATGTTGGTTCATCCCGACAAAAATATGGGTAATGAAAAGGCTGCAGAAGCTTTCAAGAAACTTCAGAATGCATACGAGATTCTTATGGATTCCTTGAAGCGAAAAGCATACGATGACGAGTTAAGGAGAGAAGAGCTTTTGAGTGTATTTCGCAGATTTCATAATGATTCTCAAAAGAATGGTAGGCACGGATTCTTTGCTTCAGGATTGGCACGATCAGATGCAAATGGTGAGGACCCATTTGGTGATTCGAGGCGGATAGCCTGCAAAAGATGTGGTGGCTTTCATGTTTGGATACACACTAAGAAACAAAAGTCTCGAGCTAGATGGTGCCAGGATTGCCAAGACTTCCATCAAGCAAAGGATGGTGATGGATGGGTGGAACAATCTTCCCAACCATTTCTTTTCGGCTTATTGCAGAAGGTTGATACCCCTGCTGCATATGTATGTGCTGATAGCAGGATATATAATGCCACTGAATGGTATATCTGTCAGGGTATGAGATGTCCAGCAAATACTCACAAGCCAAGTTTTCACGTCAACACTAGTTTAATGACCAAGCACAATTCCGGCAAAGGAACAAGTTCAGGTCAAAGAGGTGCGCGAGTGCCACCTAACATGGAAGAAACCATGACCGAGGAAGAATTCTTTGAGTGGTTGCAGAATGCCGTACAGGCTGGTGTATTCGACAATTTCAACGGCACTGCTGCAGCGGAGAGTCCCTCTTCCAAACCTGGAAACGGGACGAAAAACCAGGGCAATGGTAGTGCCGGTGCAAGCGGCAGCAGTAGCAAGAGAAAGAAAAAGGGGAAAAAGCAATGGTGA 2226 0.4367 MARKGNQQKNGLANKKGVSGGVLPKVYPGEGMKGHAKGGTQVKVYPGEELANGDSPSHFSQSGSEVASACDDISSEQNYEKSLRKEKQEEFVKHDMEESMSSGNDSGGGRLNHDVPIQEENGTLPGSDLGQQSMKSRLSCLLDGLKVKSLVENSELADRVIIRRIRLSVLSIFTAVTGWLTRQKPLFLSFANVTLKTCDNLRMKIKKAYPVLLKWLMHLGNIMLLLSVFWLDCAIRGFDSFVRMGTTSFFSVIWCSVFSVISMIGMLKFLVVLGLAALIGFFVGLTLAVLVVAIIGVVFLWFYGSFWTTTFFVILGGLAFMLSHERLALFIMTSYSVYCAWLYVGWLRLLLAFNLAFISSDVLIYFLKKNIEQQSRSNPFEQRAGMHAQSGFSNDETTQPSSSENGPGPFTDRNAGDPSTSGVDSDLTSEDEVVRLLNCSDHYSALGFTRYQNIDVSVLKREYRKKAMLVHPDKNMGNEKAAEAFKKLQNAYEILMDSLKRKAYDDELRREELLSVFRRFHNDSQKNGRHGFFASGLARSDANGEDPFGDSRRIACKRCGGFHVWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDTPAAYVCADSRIYNATEWYICQGMRCPANTHKPSFHVNTSLMTKHNSGKGTSSGQRGARVPPNMEETMTEEEFFEWLQNAVQAGVFDNFNGTAAAESPSSKPGNGTKNQGNGSAGASGSSSKRKKKGKKQW 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00972 741 MobiDBLite consensus disorder prediction 700 741 - -
Aip04g00972 741 MobiDBLite consensus disorder prediction 93 112 - -
Aip04g00972 741 Pfam Cleavage inducing molecular chaperone 551 648 IPR032843 -
Aip04g00972 741 MobiDBLite consensus disorder prediction 54 76 - -
Aip04g00972 741 SUPERFAMILY Chaperone J-domain 436 511 IPR036869 -
Aip04g00972 741 SMART dnaj_3 440 500 IPR001623 -
Aip04g00972 741 Pfam DnaJ domain 441 505 IPR001623 -
Aip04g00972 741 MobiDBLite consensus disorder prediction 651 671 - -
Aip04g00972 741 MobiDBLite consensus disorder prediction 1 88 - -
Aip04g00972 741 MobiDBLite consensus disorder prediction 651 668 - -
Aip04g00972 741 CDD DnaJ 441 497 IPR001623 -
Aip04g00972 741 PRINTS DnaJ domain signature 463 478 IPR001623 -
Aip04g00972 741 PRINTS DnaJ domain signature 480 500 IPR001623 -
Aip04g00972 741 ProSiteProfiles dnaJ domain profile. 441 508 IPR001623 -
Aip04g00972 741 Gene3D DnaJ domain 430 524 IPR036869 -
Aip04g00972 741 PANTHER OS03G0832900 PROTEIN 1 741 - -
Aip04g00972 741 MobiDBLite consensus disorder prediction 702 730 - -
Aip04g00972 741 MobiDBLite consensus disorder prediction 389 426 - -
Aip04g00972 741 ProSitePatterns Nt-dnaJ domain signature. 485 504 IPR018253 -
Aip04g00972 741 PANTHER OS03G0832900 PROTEIN 1 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00972 Aip-Chr4 13597993 13602414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00972 1 708 Miscellaneous Gene Families AT5G49580 52.150 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00972 K09534 - gmx:100789594 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00972 04 13597993 13602414 Aip04g00972 04 13597993 13602414 ECH