Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00971 ATGGATATTAGAGGGGAAGGGATTTTCCCTGATGAGGTGGTTATTCAGATTCTTGCTAGGTTACCTGTGAAGCCGCTTCTTAGGTGCAAAACAGTGTGTAAGCTTTGGTATAAATTGTTATTTGATAAGTATTTCATTCAAGTTTACAATGAGGTGTCAAGGAAGAACCCTATGATCCTTGTTGAGATTTCAGACTCATCATCAGTCTCCAAGTCTAGTTTGATCTGTGTTGATAATTTGAGGGGTGTATCTGAATTCTCACTAGACTTCTTGAATGATAGAGTTAAGGTTAGAGCATCTTGCAATGGCTTGTTGTGTTGCTCTAGTATCCCTGATAAGGGTGTGTTCTATGTCTGCAATCCTGTCACTAGGGAATTTAGGTTGCTTCCCAAGAGTAGGGAACGGCCTGTGACGAGGTTTTATCCGGACGGAGAAGCGACTTTGGTTGGCTTGGCTTGTGATTCTATGTATCAGAAGTTTAATGTTGTCTTGGCCGGTTGCCATCGCACTTTTGGCCATAGGCCTGATGGGAGTTTCATATGTTTGGTGTTCGATTCGGAGATGAACAAGTGGAGGAAGTTCATTTCCTTTCAAGATGACCATTTTACTCACATGAATAAGAACCAAGTTGTTTATGTCAATAATGCTCTTCATTGGTTGACGGCTAGCGCGACTTACATACTTGTGCTTGATTTGAGTTGTGATGTTTGGAGGAAGATGCCGTTGCCATATGAATTGAGTTACAGGGTGGGGAATAGGATTTATCTCTTGGACTTTGATGGCAGCTTGTCAGTTATTCAAATTTCGGAAGCATGGATGAACATATGGGTGCTAAAAGATTACTGGAAGGATGAATGGTGTTTGGTGGATAAGGACTCAGCACGATGTTCTCATGTAACTGAGGCACGGCGGTACAGCCTTATTATTTTTAGAACAGTGATTTTGGATCTGTTAAAATCATAG 963 0.4133 MDIRGEGIFPDEVVIQILARLPVKPLLRCKTVCKLWYKLLFDKYFIQVYNEVSRKNPMILVEISDSSSVSKSSLICVDNLRGVSEFSLDFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREFRLLPKSRERPVTRFYPDGEATLVGLACDSMYQKFNVVLAGCHRTFGHRPDGSFICLVFDSEMNKWRKFISFQDDHFTHMNKNQVVYVNNALHWLTASATYILVLDLSCDVWRKMPLPYELSYRVGNRIYLLDFDGSLSVIQISEAWMNIWVLKDYWKDEWCLVDKDSARCSHVTEARRYSLIIFRTVILDLLKS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00971 320 Gene3D - 9 45 - -
Aip04g00971 320 SUPERFAMILY F-box domain 9 76 IPR036047 GO:0005515
Aip04g00971 320 ProSiteProfiles F-box domain profile. 3 52 IPR001810 GO:0005515
Aip04g00971 320 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 7 296 - -
Aip04g00971 320 TIGRFAM F_box_assoc_1: F-box protein interaction domain 100 287 IPR017451 -
Aip04g00971 320 Pfam F-box-like 10 42 IPR001810 GO:0005515
Aip04g00971 320 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 7 296 - -
Aip04g00971 320 SMART fbox_2 9 49 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00971 Aip-Chr4 13522102 13523352 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00971 - - gmx:100811223 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00971 04 13522102 13523352 Aip04g00971 04 13522102 13523352 ECH