Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00308 ATGACAAACTCATTTAAACACAAAATGGGTTCGGCTTCGGTTCCTTTCATTATTGGTGTAGTTGTTTTAGTAATGATGAGTCTGTTGTTGAAAGTGGATGGGGGAGTTCAAACGACTCTTGAAGGACCCTTCAAGCCAGTGACGGTTCCACTTGACAAGAGCTTCCGTGGAAACGCCATGGACTTGCCAGATACAGATCCTCTTGTTCAGAGAACTGTTCAAGGTTTTGAGCCCGAACAAATCTCTCTTTCTCTCTCCTCATCTTATGCCTCCGTTTGGATTTCTTGGATAACAGGGGAGTTCCAAATTGGGGACAATATAGAACCATTAGATCCTGAAAGTGTTGGTAGCATAGTTGAGTATGGAAGGTATGGAAGGACCATGTCCCACAGATCCAAGGGTTATTCCCTTGTTTATAGTCAACTTTATCCTTTTGAAGGCCTTCAGAATTACACTTCTGGAATTATACATCATGTTCGCCTCACAGGATTAAAACCAAACACACTATATCAATACAGATGTGGAGACCCATCATTGTCAGCAATGAGTGAAGTTCACTATTTTAGGACTATGCCAGAGTCAGGGCCAAATAGCTACCCAAGCAGAATAGCAGTGGTTGGAGACTTGGGTCTTACATACAACACCACATCCACAGTTAATCACATGATTAGTAACCATCCTGATCTTGTTCTGTTGGTTGGAGATGTTAGTTATGCTAACATGTATCTCACTAATGGCACCGGCACTGACTGCTACTCTTGCTCATTTTCTGACACTCCTATTCATGAAACTTACCAGCCTCGTTGGGATTATTGGGGAAGGTACATGCAACCTCTGATCTCCAATGTCCCAATAATGGTAATTGAAGGTAATCATGAATTAGAAGAACAAGCAGAGAACAAGACATTTGTTGCTTATAGTTCTCGATTTGCATTTCCATCAGAAGAGAGTGGATCATCATCCACTTTATATTATTCTTTCAATGCTGGGGGTATACATTTCATAATGCTTGGTGCCTACACATCATTTGACAAATCAGGGGAGCAGTACAAGTGGTTGGAGAAGGACTTGGCTTCTGTTGAGAGAGAGGTAACTCCATGGTTGGTAGCTACATGGCATCCACCTTGGTACAGCACCTACACCGCACATTTTAGAGAAGCAGAGTGTATGAGGGTTGAGATGGAAGACTTGCTATATCAATATGGTGTTGACATTGTCTTCAATGGACATGTTCATGCATATGAAAGATCAAACAGAGTATACAACTACACATTGGACCCTTGTGGTCCTGTTTATATCACAGTCGGCGACGGTGGCAACCGGGAAAAGATGGCAATCACACATGCAGATGAACCTGGAAATTGTCCAGAACCATCAAGTACACCAGATAAGCTTATCAATGGTGGTTTATTCTGTGGATTCAACTTTACATCAGGTCCTGCACAAGGTAAATTCTGTTGGGATCGACAACCCGATTATAGTGCTATCAGAGAAAGTAGCTTCGGCCATGGAATTCTGGAGGTGAAAAATGAAACACATGCTTTGTGGATTTGGCATCGTAATCAAGATTATTATGGCATTGCTGGAGACGAGATTTATATTGTTAGGCAGCCTCAAAAATGTCCGGTCAAGCCAAAGGATCCTTGA 1647 0.4214 MTNSFKHKMGSASVPFIIGVVVLVMMSLLLKVDGGVQTTLEGPFKPVTVPLDKSFRGNAMDLPDTDPLVQRTVQGFEPEQISLSLSSSYASVWISWITGEFQIGDNIEPLDPESVGSIVEYGRYGRTMSHRSKGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLKPNTLYQYRCGDPSLSAMSEVHYFRTMPESGPNSYPSRIAVVGDLGLTYNTTSTVNHMISNHPDLVLLVGDVSYANMYLTNGTGTDCYSCSFSDTPIHETYQPRWDYWGRYMQPLISNVPIMVIEGNHELEEQAENKTFVAYSSRFAFPSEESGSSSTLYYSFNAGGIHFIMLGAYTSFDKSGEQYKWLEKDLASVEREVTPWLVATWHPPWYSTYTAHFREAECMRVEMEDLLYQYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEPGNCPEPSSTPDKLINGGLFCGFNFTSGPAQGKFCWDRQPDYSAIRESSFGHGILEVKNETHALWIWHRNQDYYGIAGDEIYIVRQPQKCPVKPKDP 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00308 548 Pfam Calcineurin-like phosphoesterase 202 414 IPR004843 GO:0016787
Aip04g00308 548 PANTHER ACID PHOSPHATASE RELATED 20 545 IPR039331 GO:0003993
Aip04g00308 548 Gene3D - 197 463 IPR029052 -
Aip04g00308 548 Gene3D - 471 544 IPR029052 -
Aip04g00308 548 SUPERFAMILY Purple acid phosphatase, N-terminal domain 56 192 IPR008963 GO:0003993|GO:0046872
Aip04g00308 548 Pfam Purple acid Phosphatase, N-terminal domain 78 190 IPR015914 GO:0003993|GO:0046872
Aip04g00308 548 CDD MPP_PAPs 199 536 IPR041792 -
Aip04g00308 548 PANTHER PURPLE ACID PHOSPHATASE 13 20 545 - -
Aip04g00308 548 SUPERFAMILY Metallo-dependent phosphatases 202 525 IPR029052 -
Aip04g00308 548 Gene3D - 77 194 - -
Aip04g00308 548 Pfam Iron/zinc purple acid phosphatase-like protein C 484 523 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00308 Aip-Chr4 3942765 3949709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00308 77 471 Miscellaneous Gene Families AT2G03450 26.432 4.74e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00308 K22390 - gmx:100784006 966.066