Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00305 ATGGGCACAAAGCTTGATGTAGCATCTGCTGCCGAAAGTCCCAAGATGTCTGCAGCACCTTCTAGTGGCCAAAAGCTCTCTTTATTTGCTGCAAAATCTGGTTTTGTCATCCCCAAAAACAAATTATCAGGTTCATTGGTTCCTGTTTTCCGAGGGACTAAAAAGGATGGGGTCACTGGAGCTATCAATGAAGAAACATCAAAACAAATTGTGAGGAAAACAAAATGGGGACCTGATCTGGCACAGGATGCAGCTGTGAAGAAGGCAAAGGCTTTAGCTTTACAGATTCGAGTAGATCAAATTACAAAGCAATTGGACTCAGAAAGACTGGAGGTCGGGAGTCCTCAGAACTCACCACTACGGGCACAATATCGAGATCAAAGCAACTATGACCCAGCAATTAATAGCAAGTCAGAAATGCTCGAATTTGAAAAGCGGGAAGCAATAGGTGAAATACTAAAACTAGATCCTAATTACAAGCCTCCTCCTGGTTTTAAGCCGTTGTTGAAAGAGGCCAGCATTTCTTTGCCTGTCCTAGAGTATCCTGGGTACAATTTTATTGGTCTTATATATGGGCCTGAAGGTGATAATCAAAAGCAACTCGAAAAGGAAACTGGTGCCAAGATTAAATTACATGGAACCAAAGCAGACACTGGAGAGAAAGGTGAAATTAAGCCAGGAACTGATATCACATGCAGTTACAAAGAGATGTATGTCAATATATCAGCTGATAGTTTTGATAAAGTGGATGCAGCAGTGTCCATCATTGAACTACTAATTTCCTCTGTAGCTGGGAATTTAGTTTCTGGTTCCACACCCTCTGTATCTGGGGATGGCACTAATGTTCTGAGTCAAACCCAAGATGGGCTACCTTCTGGTCCAGTCTCTATGGGTCTGGAAAATCAGGCTGCAGCACAAGCAATAGCTGGCACACAAATTCATGGAAATCACCTTCAATACTCCAGTCCATGGTTTTCGGCAGTTCCGTCTCATAACCCTGTAATTGCTTCTGATAATATGCCCCCACAAAATCCATCAGATCTTGCTAGAACTCCCAATTTTCAGTCACAAACAATGAATCCTTCAAACATGCCTTCAGCCTTTGGTTTTCAACCTGTACCTTTTGCTGGATTCCACCTGGCTATTCCAAATCAACAATCTTCTGTGCAAGGACTACCTCCTAGGCAGATTTTACAGCATTCACAGATGACAAGTTCCCTGGGTCACGTTGGACCCCCAAGAAATCCATCAATGATATCTGTACAAAATTGTTCCGCTCCTACAAATGTTTCAATGTCATTTCCGGTTACTTTAAGCCAATCAGCACAAGTAGGACAACTCCAGACATCAGGGTCTTCAATGCCTCAGCCTCTATCTGGTATGTCACCTTTAACGGTACCTAACCGCCCATTTATCCCTCCCAACAACACTTCTGGACAGAATGGAGTCACTATTAAAATGTCTTCAGATCTGAACAGTATGGGGCCAATGGCTCCACCCCCAAGGCCTCTATCTGTACATCCACAACCTGATGTTGCGTTTAGGCCACTACAATCAAATATGTCAATGATGCCTCGACCTGCTGCTTTTCCACCACAGCAATCAGGAACTTCCCCTGGACTGCCATCATCTTTGGGAGCAATGGTTCCCCCAGTACCTGCAACTACTCATTCATCTGCAAACCATTTATCTCGACCTCTTTCATTTCCTTCACCAGGAATGGCTCCTTCAGGTCCATTACCGCAGCAATCAGGAACGCCTAATTCTGCATCTGGAGTTTCCTCTTATCACACCCATGTAAAGCCACCAGTCTTGATGCCCTCAACTTCAGGAAATTTCACTTTTCAATCACAGCGGCCCAATGCAGATAGTCACGTGATTTCCGGACCGAACAGTCAAGCTACTGTACAGGGTGGTATATTTGGTGCGCCTGATAAAGCTTTTCAAGTCTTTCCAAGGACGCAAGTTCCCAACCAGATGGATCAAACTCAAGCTCATGCATCCGCTGTCCCCTTTGGCGGAAGATCTGGTCTGGTCCCTATTCCACCTAGACAAGCTGCATTCCCATATGCTGGTCAACCTGGTCCTAGATCTCCAGTCCCACAAATGGGTATGAGGAACTTAATTTCTCCTCAAATGCCCAATTTTCCCACTGCTGGTGGTGTACCAAGAAGCCCGCACATCCAGCAAAATTATCCTGCTCCGAGAACATGGGCAGGTATACCCATGCCCCCAAATCATAAATTTGGTAATCCCTCCATTGCTTCTGGTAAGCGGGCATATCCTGCAGACCAGATTTATGATCCTTTTTCACCTACTTCAATTGCACCTCCACGGCAGAAAGGTAATCCAGGAAAATAA 2361 0.4477 MGTKLDVASAAESPKMSAAPSSGQKLSLFAAKSGFVIPKNKLSGSLVPVFRGTKKDGVTGAINEETSKQIVRKTKWGPDLAQDAAVKKAKALALQIRVDQITKQLDSERLEVGSPQNSPLRAQYRDQSNYDPAINSKSEMLEFEKREAIGEILKLDPNYKPPPGFKPLLKEASISLPVLEYPGYNFIGLIYGPEGDNQKQLEKETGAKIKLHGTKADTGEKGEIKPGTDITCSYKEMYVNISADSFDKVDAAVSIIELLISSVAGNLVSGSTPSVSGDGTNVLSQTQDGLPSGPVSMGLENQAAAQAIAGTQIHGNHLQYSSPWFSAVPSHNPVIASDNMPPQNPSDLARTPNFQSQTMNPSNMPSAFGFQPVPFAGFHLAIPNQQSSVQGLPPRQILQHSQMTSSLGHVGPPRNPSMISVQNCSAPTNVSMSFPVTLSQSAQVGQLQTSGSSMPQPLSGMSPLTVPNRPFIPPNNTSGQNGVTIKMSSDLNSMGPMAPPPRPLSVHPQPDVAFRPLQSNMSMMPRPAAFPPQQSGTSPGLPSSLGAMVPPVPATTHSSANHLSRPLSFPSPGMAPSGPLPQQSGTPNSASGVSSYHTHVKPPVLMPSTSGNFTFQSQRPNADSHVISGPNSQATVQGGIFGAPDKAFQVFPRTQVPNQMDQTQAHASAVPFGGRSGLVPIPPRQAAFPYAGQPGPRSPVPQMGMRNLISPQMPNFPTAGGVPRSPHIQQNYPAPRTWAGIPMPPNHKFGNPSIASGKRAYPADQIYDPFSPTSIAPPRQKGNPGK 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00305 786 MobiDBLite consensus disorder prediction 578 596 - -
Aip04g00305 786 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 19 780 - -
Aip04g00305 786 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 174 267 IPR036612 GO:0003723
Aip04g00305 786 MobiDBLite consensus disorder prediction 522 607 - -
Aip04g00305 786 PANTHER RNA-BINDING PROTEIN RELATED 19 780 IPR045071 -
Aip04g00305 786 MobiDBLite consensus disorder prediction 748 786 - -
Aip04g00305 786 SMART kh_6 170 261 IPR004087 GO:0003676
Aip04g00305 786 Gene3D K Homology domain, type 1 165 287 IPR036612 GO:0003723
Aip04g00305 786 MobiDBLite consensus disorder prediction 1 23 - -
Aip04g00305 786 Pfam KH domain 185 253 IPR004088 GO:0003723
Aip04g00305 786 ProSiteProfiles Type-1 KH domain profile. 185 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00305 Aip-Chr4 3917498 3925756 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00305 K13095 - gmx:100777227 908.672