Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00304 ATGAGTGATCTAAGATTGTGTTGTAGCATATTACTGGTGTTGGTTGGTTTTGCAAGGTGTGATTTGGCGAAAGACAGAGACGAATGTGCAGAGAAACTGATTGGGCTAGCTCCCTGTATCCCTTATGTTAGTGGGCAAGCCAAGATCCCCACCATAGACTGCTGCAGTGGCCTCAAAGTGGTTCTTGATCAGAGCAAGAAATGCATCTGCATCCTCATCAAAGATCGCAACGATCCTAACCTTGGCATTACCATCAATGCCACCCTCGCTCTTCAACTTCCTATTTCTTGTCATGCACCATCTAATATTTCCCAGTGCGTCGATCTTTTGCATTTGCCACCTAACTCTCCTGATGCTAAGGTGTTTGAAGCCCTCTACTTTGGTTTTGAAAGTTGGAAAAAACTAAGAAGCTGCGATTAA 420 0.4429 MSDLRLCCSILLVLVGFARCDLAKDRDECAEKLIGLAPCIPYVSGQAKIPTIDCCSGLKVVLDQSKKCICILIKDRNDPNLGITINATLALQLPISCHAPSNISQCVDLLHLPPNSPDAKVFEALYFGFESWKKLRSCD 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00304 139 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 122 - -
Aip04g00304 139 Pfam Probable lipid transfer 24 106 IPR016140 -
Aip04g00304 139 CDD AAI_LTSS 36 98 - -
Aip04g00304 139 Gene3D - 26 106 IPR036312 -
Aip04g00304 139 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 107 IPR036312 -
Aip04g00304 139 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 6 122 IPR043325 -
Aip04g00304 139 SMART aai_6 29 106 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00304 Aip-Chr4 3914178 3915508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00304 21 130 Acyl Lipid Metabolism Gene Families AT2G44300 59.091 1.10e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00304 - - pvu:PHAVU_001G268300g 201.445