Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00273 ATGGCTTCTCCTCCAGATAAAAGCAAAACAATAAAGCTGGAAAGATACAACAGCTACATCCGAAGAGTAAACAGCACCAAACTCCTCAACGCTTCTTCCAAGCTTCTTTTCCGAGCAACAATTCTCGTAGCTCTTATCCTTGTATTCCTCTTCACCTTCAACTACCCTCCACTCAACTCATCTCCTTCTAGTAACAACAACAACAACAACAACCACCACCGTCACCGCTTCCTCTCCTCCGCTTTCGGCGGAGGAGGCGTGGGAGGCGCATCCTGGGAGAAGCAAGTCCGCCACTCCTCCACCCCACGCCGCCCCAACGGCATGTCGGTGCTGGTCACCGGCGCCGCAGGCTTCGTGGGTTCCCACTGCTCCCTGGCACTCAAGAAACGCGGCGACGGCGTCCTCGGCCTCGACAACTTCAACTCATACTACGATCCGTCGTTGAAGCGAGCACGCCAAGACCTCCTCTCAAAGCACCAAATCTTCATCGTCGAAGGTGATCTAAACGACACGCCGTTGCTCAAGAAACTCTTCGATGTCGTTCCATTCACACACATTCTCCACCTTGCCGCACAGGCTGGCGTCCGTTACGCCATGCAGAACCCCCAATCCTACGTGGCATCCAACATCGCCGGCTTCGTCAACCTTCTAGAAGTAGCGAAAGCCGCGAACCCTCAACCGTCAATTGTGTGGGCCTCTTCCAGTTCCGTGTACGGACTCAACACACAGAACCCTTTCTCGGAGCTTCACCGCACCGACCAACCGGCGAGCCTCTACGCCGCCACGAAGAAAGCCGGAGAGGAAATAGCGCACACTTATAACCATATCTACGGTCTTTCCCTCACCGGGCTGAGATTCTTCACGGTGTACGGACCTTGGGGGAGACCAGACATGGCGTACTTCTTTTTCACGAAGGACATTCTTCAAGGGAAGGGGATCGATGTTTACCAGACGCAGGACGGGAAGGAGGTGGCGCGTGATTTCACGTACATCGATGACGTGGTGAAGGGGTGCGTGGGGGCGCTGGATACGGCGGAGAAGAGCACCGGAAGCGGGGGGAAGAAGAGGGGACCGGCGCAGCTGAGGATCTATAATTTGGGGAACACGTCGCCGGTGCCGGTGGGGAAGTTAGTTGGGATATTGGAGAGTCTGTTGAATGTGAAGGCGAAGAAGCACGTGATTAAGATGCCACGAAACGGCGACGTTCCATACACGCACGCTAACGTCAGCCTGGCGTTTAGGGATTTCGGGTATAAGCCAACCACGGATCTCGCCTCTGGTTTGAGGAAGTTCGTAAAGTGGTACGTTGGCTATTATGGGATCCAGCCGAGGGTAAAAAAGGAAATTCCCAACTCCAGTGAGCAACCCGAGGATTCCGCTTGA 1383 0.5466 MASPPDKSKTIKLERYNSYIRRVNSTKLLNASSKLLFRATILVALILVFLFTFNYPPLNSSPSSNNNNNNNHHRHRFLSSAFGGGGVGGASWEKQVRHSSTPRRPNGMSVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQDLLSKHQIFIVEGDLNDTPLLKKLFDVVPFTHILHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVAKAANPQPSIVWASSSSVYGLNTQNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILQGKGIDVYQTQDGKEVARDFTYIDDVVKGCVGALDTAEKSTGSGGKKRGPAQLRIYNLGNTSPVPVGKLVGILESLLNVKAKKHVIKMPRNGDVPYTHANVSLAFRDFGYKPTTDLASGLRKFVKWYVGYYGIQPRVKKEIPNSSEQPEDSA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00273 460 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 102 441 IPR036291 -
Aip04g00273 460 Gene3D - 107 440 - -
Aip04g00273 460 PRINTS Nucleotide sugar epimerase signature 136 152 - -
Aip04g00273 460 PRINTS Nucleotide sugar epimerase signature 326 341 - -
Aip04g00273 460 PRINTS Nucleotide sugar epimerase signature 361 376 - -
Aip04g00273 460 PRINTS Nucleotide sugar epimerase signature 401 418 - -
Aip04g00273 460 PANTHER EPIMERASE-RELATED 1 449 - -
Aip04g00273 460 Pfam GDP-mannose 4,6 dehydratase 111 430 IPR016040 -
Aip04g00273 460 PANTHER UDP-GLUCURONATE 4-EPIMERASE 6 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00273 Aip-Chr4 3395969 3398073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00273 1 460 Miscellaneous Gene Families AT3G23820 79.872 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00273 K08679 - zju:107422361 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00273 04 3395969 3398073 Aip04g00273 04 3395969 3398073 ECH