Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00271 ATGAATCTCCAACATCAACCCCAAAACGGCGTCGTTTTGCCTCCACTTTCATCGTTCGTGTGCGACTGGGAACAAGACGAGCCTTTCTCAGAGGAAGACCTTCGCGCCATCGAAGCCATCGAATCCCGCTTTTACAACAACAAGCGCCCTTTCTCCGATTCCTCCGCCGCTAAAGACGACGCCGACGACGCATCTCCCGATAACTCTGCTCGTCGGAGCCACCGCCGCCGCCGATTGCCGAGATCACTTGTCGCTCTTCAGCACCCTAATGCCCATTCCTTGTCACCTTGCCAAGGCTACTCAAGGATGCGGTTGCCTGTAATAAAGTTTGCTGGCCAAATTATGTATAGTAGGACGTTTGCTGATGTAGAGAAATCTGCAGAAAAGCTATTGAAAATTCTTGAAGAAAAGAAAAGACAGATGGTGCAAATTCCACTTGGATTTGACATTGAGTGGAAACCTAGCTTCAGAAGCGGTGTTCCACCTGGGAAAGTAGCAGTTATGCAGATATGTCATGGCACTAGCCATTGTCATGTTCTACATCTAATTCATTCTGGAATCCCTAAAAATCTACAGATCCTGCTTGAAGATCCTTTAATTTTGAAGGTTGGAGCTGGGATTCGTGGAGATGCTGCGAAGGTTTTTAGAGACTATAAAATATCTGTTAAAGGTTTGGAAGATCTTTCTTTTCATGCTAATAGAAAGCTAGGCGGAAGTCCAAATCAGTGGGGTCTTGCATCTTTGGCTGAAAAGCTTTTATCCAAACAGCTTAAAAAGCCAAACAAAATAAGACTGGGGAATTGGGAGACTCCTGTTTTGTCAAAGGAGCAATTACAGTATGCAGCCACAGATGCATTTGCTTCCTGGCATCTCTTTCAGGCTATTAAAGATCTTCCAGAGGCCCAAGTGGAAAGTACTGACAAAAGTGGCAAAGTGGAAGATGTACCGCAACAATGA 957 0.4535 MNLQHQPQNGVVLPPLSSFVCDWEQDEPFSEEDLRAIEAIESRFYNNKRPFSDSSAAKDDADDASPDNSARRSHRRRRLPRSLVALQHPNAHSLSPCQGYSRMRLPVIKFAGQIMYSRTFADVEKSAEKLLKILEEKKRQMVQIPLGFDIEWKPSFRSGVPPGKVAVMQICHGTSHCHVLHLIHSGIPKNLQILLEDPLILKVGAGIRGDAAKVFRDYKISVKGLEDLSFHANRKLGGSPNQWGLASLAEKLLSKQLKKPNKIRLGNWETPVLSKEQLQYAATDAFASWHLFQAIKDLPEAQVESTDKSGKVEDVPQQ 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00271 318 CDD WRN_exo 127 296 - -
Aip04g00271 318 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED 84 302 - -
Aip04g00271 318 PANTHER 3-5 EXONUCLEASE 84 302 - -
Aip04g00271 318 Pfam 3'-5' exonuclease 127 296 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aip04g00271 318 SUPERFAMILY Ribonuclease H-like 146 296 IPR012337 -
Aip04g00271 318 Coils Coil 120 140 - -
Aip04g00271 318 Gene3D - 98 302 IPR036397 GO:0003676
Aip04g00271 318 SMART 35exoneu6 121 300 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aip04g00271 318 MobiDBLite consensus disorder prediction 51 82 - -
Aip04g00271 318 MobiDBLite consensus disorder prediction 53 70 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00271 K22807 - gmx:100801291 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00271 04 3359870 3364616 Aip04g00271 04 3359870 3364616 ECH