Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00267 ATGAGTATCGTTGATAAGATGCTGATCAAAGGCATTCGGAGCTTCGACCCAGAGAAAAAGAACGTCATCACCTTCTTCAGACCCTTAACCCTAATCGTTGGCCCCAACGGTGCTGGAAAAACCACAATCATCGAGTGCTTGAAGCTTTCTTGCACTGGCGAGTTGCCTCCTAATGCAAGGTCTGGTCACAGTTTCATTCATGACCCCAAGGTTGCTGGTGAAACTGAAGCGAAGGACCAGATTAACCTCCGATTTAAGACAGCAGCGGGAAAAGACGTGAAAGTTTGCCTTAGCTATAGATGTGCAGACATGGATAAGGAAATTCCTGCGCTCATGGGTGTTTCTAAGGCCATTTTAGAAAATGTTATATTTGTTCATCAAGATGAAGCGAATTGGCCACTGCAGGATCCTTCCACATTGAAGAAAAAGTTTGACGACATCTTTTCTGCAACTCGATATACAAAGGCACTGGAGGTTATAAAGAAACTTCACAAGGAACAAGCTCAAGAGATAAAGACTTTCAAGCTTAAACTTGAGAATCTTCAAACATTGAAAGATGCAGCTTATAAGCTTCGTGAAAGCATTGCCCAAGATCAGGAGAGTACAGAATCTCTAAAATGTCAGTTACAGGAGTTGGAAGGAAGCATTAAAGATGTGGATGATAAAATACATCATGCAGAGAAAACACTGAAAGTTTTGCGAAAGCTGCAGGACCAAATCTCAACTAAAACTGCTCAACGAAGCACTCTGTTTAGGGAACAACAGAAACAATATGCAGCTCTTACCGAGGATAATGAAGACACTGATGAAGAGTTGATGGAATGGAAGACAAAGTTTGAAGAAAGGATTGGAATTTTACAAACAAAAATAAGCAAATTGGAGAGAGAATTGAATGATATTGACACTAAAAGTTCTTTCCTTAAGCAGACTATCAATGATTCCATCTGGGAGATCAGCAAGCTTCAAACTGAAGCTGGAGCTCACAAGTCGTTGAAGAATGAACGTGATTTGGCTTTAGATCTTGAGAAGGACCTCCAAGATAAAAAGAAAACAAATGACAATAAACTCAAGATGGCATGGGACTGCTACATGAATGGCAATAACCGGAAAAATACTCAGCTCAAAAAAGCGCTAAATCAGAGATCAATCTTTGACATTTAA 1161 0.4014 MSIVDKMLIKGIRSFDPEKKNVITFFRPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETEAKDQINLRFKTAAGKDVKVCLSYRCADMDKEIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKEQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQESTESLKCQLQELEGSIKDVDDKIHHAEKTLKVLRKLQDQISTKTAQRSTLFREQQKQYAALTEDNEDTDEELMEWKTKFEERIGILQTKISKLERELNDIDTKSSFLKQTINDSIWEISKLQTEAGAHKSLKNERDLALDLEKDLQDKKKTNDNKLKMAWDCYMNGNNRKNTQLKKALNQRSIFDI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00267 386 CDD ABC_Rad50 4 137 IPR045171 -
Aip04g00267 386 Coils Coil 202 236 - -
Aip04g00267 386 Coils Coil 331 351 - -
Aip04g00267 386 Coils Coil 164 184 - -
Aip04g00267 386 Coils Coil 251 310 - -
Aip04g00267 386 Gene3D - 3 269 IPR027417 -
Aip04g00267 386 PANTHER RAD50 1 372 - -
Aip04g00267 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 262 IPR027417 -
Aip04g00267 386 Pfam AAA domain 7 222 IPR038729 GO:0140664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00267 Aip-Chr4 3317573 3321136 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00267 K10866 - jre:109008437 597.045