Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00227 ATGGAAAAGCCATCAATAATGATCTCAAGAACCTGCTGCTACGATCACCAACTCCGCTTTGCAACCCTCATCTCTCTCCTCTTATGTACCATAATCGTAACACACTTCAATCATTCTCCTTCACTTGAACTAGTATTCAACAACAATGGAGAACAAGTAGATCCATGCCATGGCAGGTACGTTTACGTTCACCACCTTCCCCCTCGCTTCAACCGCTACTTGATTGACCACTGCGATTCTCTAACCAGAGGAACCGATAAGCCCAACATGTGTCCGTACATGAAAAACATGGGCTTCGGCCCAAAACTCGATTCTTCCGGTTCCAAATCGCCAGAGCTTTTCACGAACAGCAATTGGTATGAAACAAACCAATTCTCATTAGAGCTCATCTTTCATCACAAGATAAAAAATTACAAGTGTTTGACGAACGACTCGTCGGTAGCTTCGGCGATTTTCGTTCCGTTCTACGCCGGCCTCGACGTCAGTAGATTCCTTTGGGTCTCTAATCTGACGGTCAGGGATGCTTCTGGAAGAGACCTTGTTAGCTGGCTTTCGTGTCAAAAGGAGTGGAAAAGAATGTGGGGAAGGGACCATTTCGTAATTTCCGGGAGGATTTCTTGGGACTTCAGAAGACAACATAATACTTTGTCGGATTGGGGAAGCAACTTTAGATTCTTACCGGAATCCATGAACATGTCAATGCTGGCCGTGGAGGGAAGCTCATGGAACAATGATTACGCTGTTCCATATCCAACCTCGTTCCATCCATTGAAAGAAAGCGAAATTGTTGAGTGGCAGAGGAAGATCAGGAACAGAGAGAGGCCTCACTTGTTCACCTTCACCGGCGCCCCTAGGCCTGAAATCGAGGATTCCATTAGAGGAAAAGTGATACAACATTGTAGAAGCTCGCGTGCTTGCAAATTCATTGATTGCAGCTATGGCATTGGTAAAGAAAAATGTGAGGATCCTGTTAACGTTATAATGGAGTTTGGGGATTCAGTGTTCTGTTTACAGCCTCCGGGTGATTCTTACACAAGAAGGTCGATTTTCGATTCAATGGTGGCTGGTTGTGTTCCGGTTTTCTTCCACCCTGGCACGGCTTATTCGCAGTACCGATGGAATTTACCGCAGAATCGAACCAAGTATTCAGTTTATATACCTGTGAGGGATGTGAAAGAATGGAATGAGAAAAATATTAGTGTGGAGAAGGTGTTAATGGCGATTCCAGAGGATGAGGTAGTTGCATTGAGAGAGGAGGTTATTAAACTGATTCCAAGTATAATTTATGCAGATCCAAGGTCTAACATTGAAGATGCATTTGATTTGGCAGTTAAAGGGATTCTTGAAAGGATAGAGAGAGTGAGGGAAGCAATTAGGAATGGGAGAGATCCTAGCGTTGGTTTTGCTGATGAAGATCATTACAAGAAATGGGATGCATGGAGATAG 1446 0.4419 MEKPSIMISRTCCYDHQLRFATLISLLLCTIIVTHFNHSPSLELVFNNNGEQVDPCHGRYVYVHHLPPRFNRYLIDHCDSLTRGTDKPNMCPYMKNMGFGPKLDSSGSKSPELFTNSNWYETNQFSLELIFHHKIKNYKCLTNDSSVASAIFVPFYAGLDVSRFLWVSNLTVRDASGRDLVSWLSCQKEWKRMWGRDHFVISGRISWDFRRQHNTLSDWGSNFRFLPESMNMSMLAVEGSSWNNDYAVPYPTSFHPLKESEIVEWQRKIRNRERPHLFTFTGAPRPEIEDSIRGKVIQHCRSSRACKFIDCSYGIGKEKCEDPVNVIMEFGDSVFCLQPPGDSYTRRSIFDSMVAGCVPVFFHPGTAYSQYRWNLPQNRTKYSVYIPVRDVKEWNEKNISVEKVLMAIPEDEVVALREEVIKLIPSIIYADPRSNIEDAFDLAVKGILERIERVREAIRNGRDPSVGFADEDHYKKWDAWR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00227 481 Pfam Exostosin family 56 395 IPR040911 -
Aip04g00227 481 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 32 465 IPR004263 GO:0006486|GO:0016757
Aip04g00227 481 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE GT14-RELATED 32 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00227 Aip-Chr4 2637198 2640395 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00227 - - gmx:100780962 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00227 04 2637198 2640395 Aip04g00227 04 2637198 2640395 ECH