Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00221 ATGGCTAACCATAACGGTTCTCATCAAGGATGCTGCAAAACGGGTCCTGGCTATGCTACACCACTTGAAGCTATGTCCGGTCCCAGAGAGACTCTCATTTATGTCACTGCTGTCTACACTGGAACAGGAGTACAGAAGCCTGATTATCTGGCCACAGTGGATATAGATCCAAACTCCCCAACTTATTCAAAAGTCATTCATAGGCTACCTGTTCCCTATTTAGGCGACGAATTGCACCATACTGGGTGGAATTCATGCAGCTCCTGCCATGGTGATCCATCCGCAGAGCGACGATTTCTTGTTGTACCTGGACTGGTATCAGGTCGCATATATGTGGTTGACACAAAAACAAATCCAAGAGCACCATCTTTGCATAAAGTTGTTGAGCCTTCAGATATCATAGAGAAGACTGGATTAGCTTTTCCACACACATCTCATTGCCTTGCCTCCGGCGATGTAATGGTTTCGTGTCTTGGAGATAAGGATGGAAATGCTGAAGGAAATGGATTTCTTCTTCTTGATTCAGATTTTAATGTGAAAGGAAGGTGGGAGAAACCAGGGCACAGTCCAACATTTGGGTATGACTTTTGGTATCAACCACGTCACAATACTATGATCAGCACATCGTGGGGTGCTCCTGCTGCCTTTACCAAAGGCTTTAACCTGCAGCATGTCTCGGACGGATTATACGGGAGGCATCTCCATGTGTACAACTGGCCTGGGGGCGAACTGAGACAAACACTGGACCTTGGTGATTCAGGGCTCTTACCATTGGAGATAAGGTTCCTGCATGATCCTTCCAAAGACACAGGTTTCGTTGGCAGTGCATTGACTAGTAACATGATTCGATTTTTCAAGACCAAGGATGGATCATGGGGCCATGAGGTTTCCATATCAGTGAAACCACTTAAAGTGCAAAACTGGATTCTTCCCGAAATGCCTGGACTTATAACTGATTTCCTTATCTCTCTCGACGACCGGTTTCTGTACTTTGTAAACTGGCTTCATGGAGATATAAGACAGTACAATATTGAGGATGTTAACAATCCTGTACTTACTGGCCAAGTATGGGTTGGTGGACTTATTCAGAAAGGTAGCCCTGTGGTAGCTGTAGGGGAAGATGGTCAAACTTGGCAAACTGATGTGCCAGAAGTTCAGGGCAAAAAGTTGAGAGGCGGCCCTCAGATGATTCAGTTGAGTCTGGACGGTAAGAGGCTATATGTTACAAACTCACTGTTCAGTACATGGGATAAACAATTTTATCCAGAGCTTGTGGAGAAAGGAGCACACATGTTGCAGATTGATGTTGATTCTGAGAAAGGTGGTCTCAAGGTTAATCCAAACTTCTTTGTTGACTTTGGAGCTGAGCCTGATGGCCCTTCCCTTGCCCATGAGATGAGATATCCCGGTGGTGACTGCACTTCAGATATATGGATTTAA 1440 0.4521 MANHNGSHQGCCKTGPGYATPLEAMSGPRETLIYVTAVYTGTGVQKPDYLATVDIDPNSPTYSKVIHRLPVPYLGDELHHTGWNSCSSCHGDPSAERRFLVVPGLVSGRIYVVDTKTNPRAPSLHKVVEPSDIIEKTGLAFPHTSHCLASGDVMVSCLGDKDGNAEGNGFLLLDSDFNVKGRWEKPGHSPTFGYDFWYQPRHNTMISTSWGAPAAFTKGFNLQHVSDGLYGRHLHVYNWPGGELRQTLDLGDSGLLPLEIRFLHDPSKDTGFVGSALTSNMIRFFKTKDGSWGHEVSISVKPLKVQNWILPEMPGLITDFLISLDDRFLYFVNWLHGDIRQYNIEDVNNPVLTGQVWVGGLIQKGSPVVAVGEDGQTWQTDVPEVQGKKLRGGPQMIQLSLDGKRLYVTNSLFSTWDKQFYPELVEKGAHMLQIDVDSEKGGLKVNPNFFVDFGAEPDGPSLAHEMRYPGGDCTSDIWI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00221 479 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 46 411 - -
Aip04g00221 479 Pfam 56kDa selenium binding protein (SBP56) 12 479 IPR008826 GO:0008430
Aip04g00221 479 PANTHER METHANETHIOL OXIDASE 4 479 IPR008826 GO:0008430
Aip04g00221 479 PANTHER SELENIUM-BINDING PROTEIN 1 4 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00221 Aip-Chr4 2560316 2564221 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00221 K17285 - gmx:100788278 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00221 04 2560316 2564221 Aip04g00221 04 2560316 2564221 ECH