Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00217 ATGTTTCAGTTGGAGGAAGCAATATTGGATTTTGCCGAAGGCTTGAGAGTTCTTGGAGTAAAACCAGAGGAAAAGATTGCACTTTTTGCTGATAATTCATGTCGCTGGCTTGTAGCAGATCAAGGCATGATGGCAAGTGGAGCAATCAATGTCGTGAGGGGAACAAGATCGTCAATTGAAGAGCTGTTTCAAATATACCAACACTCTGAAAGCGTTGCACTAGCTGTGGACACACCTGAAATGTTTAATCGGATTGCAAATTCATTCTATGCAAAGGCTTCCATGAGATATATTATTCTTCTTTGGGGAGACAAATCATCCCTGGTTTGTGAAGGAAACAAGGAGGTGCCAGTCTTCACATTCACAGAAGTCATAGACTTGGGACGTGAGAGTCGCATGGCATTGATTGATTCTCGTGATGGTGATAATCAATTTAAGTATGAAGCAATTAAGTCTGATGATATTGCTACTCTTGTATACACAAGTGGAACAACTGGAAATCCAAAAGGTGTTATGCTTACTCATCGGAATCTTTTACATCAGTATTTCATTTTCTCATACGGTGTTGAACAAGTATACACAACTGTGAAAAACTTAAAGGATGATTTGAAGCGTTATCAACCACATTACTTGATTTCAGTTCCTCTAGTTTATGAAACATTATATAGTGGCATCCAGAAGCAGATATCTACAAGCTCCCTAATCAGAAAGCTTGTTGCACTCACATTCATTAGGATCAGCTTAGCATACATGGAGTGTAAGCGGATTTATGAGGGTAAATGTCTAACAAAGAATGAGAAGCAGCCTTCTTATCTGTATTCAACGTTGGAATGGTTGTGGGCAAGAGTAGTTGCTGCAATAATATTTCCAATTCATATGTTGGCAAAGAAAGTGGTCTACAGTAAAATCCATTCAGCTATTGGAATATCAAAGGCTGGAGTAAGCGGTGGTGGAAGCTTACCTATTCATGTTGACAAATTTTTTGAGGCTATTGGTGTTAAAGTGCAGAATGGATATGGTTTAACAGAAACTTCACCAGTTATTGCTGCTCGGCGACCTGAATGTAATGTTATTGGATCTGCTGGGCATCCAATTAGGCATACAAAATTTAAAGTTGTAGATTATGAAACTGGTGAAGTTCTTCCACCTGGTTCAAAGGGAATTTTGAAAGTGACGGGCCCAGCATTGATGAAGGGATACTACAAGAATCCTTCAGCTACAAATCAGGCCTTGGATGGAGATGGCTGGCTGAATACTGGTGATATAGGTTGGATTGTTCCCCATCATTCAACTGGGCGGAGTCGCCATTCTGGTGGTGTGATAGTTCTGGAAGGTCGTGCTAAAGACACTATTGTGCTTTCAACAGTAGGCGAAAATGTTGAACCAGGTGAACTTGAAGAAGCTGCCATGAAAAGTACCCTCATACAACAAATTGTCGTTATTGGCCAGGATAAGCGACGTCTTGGAGCTTTAATTGTTCCTAACAAAGAAGAAGTCTTAAAAGTGGCAAGGGAATTGTCAGTTATAGATTCAAACAGTTCAGATATCAGTCAGGAAAAAGTGACCAGCCTATTATATAAAGAATTGAACACCTGGACATCTGATTTTTCATTTCAAATTGGTCCAATTCTTGTCGTTGATGATCCCTTCACGATTGATAATGGGCTAATGACACCCACCATGAAGATCCGAAGGGATAGAGTTGTGGCTCAATACAGGGATCAAATAGAAAACCTATACAAGTGA 1746 0.3992 MFQLEEAILDFAEGLRVLGVKPEEKIALFADNSCRWLVADQGMMASGAINVVRGTRSSIEELFQIYQHSESVALAVDTPEMFNRIANSFYAKASMRYIILLWGDKSSLVCEGNKEVPVFTFTEVIDLGRESRMALIDSRDGDNQFKYEAIKSDDIATLVYTSGTTGNPKGVMLTHRNLLHQYFIFSYGVEQVYTTVKNLKDDLKRYQPHYLISVPLVYETLYSGIQKQISTSSLIRKLVALTFIRISLAYMECKRIYEGKCLTKNEKQPSYLYSTLEWLWARVVAAIIFPIHMLAKKVVYSKIHSAIGISKAGVSGGGSLPIHVDKFFEAIGVKVQNGYGLTETSPVIAARRPECNVIGSAGHPIRHTKFKVVDYETGEVLPPGSKGILKVTGPALMKGYYKNPSATNQALDGDGWLNTGDIGWIVPHHSTGRSRHSGGVIVLEGRAKDTIVLSTVGENVEPGELEEAAMKSTLIQQIVVIGQDKRRLGALIVPNKEEVLKVARELSVIDSNSSDISQEKVTSLLYKELNTWTSDFSFQIGPILVVDDPFTIDNGLMTPTMKIRRDRVVAQYRDQIENLYK 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00217 581 Pfam AMP-binding enzyme 3 185 IPR000873 -
Aip04g00217 581 Pfam AMP-binding enzyme 186 453 IPR000873 -
Aip04g00217 581 Gene3D - 452 578 IPR045851 -
Aip04g00217 581 PRINTS AMP-binding signature 153 164 IPR020459 -
Aip04g00217 581 PRINTS AMP-binding signature 165 173 IPR020459 -
Aip04g00217 581 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 3 181 - -
Aip04g00217 581 ProSitePatterns Putative AMP-binding domain signature. 158 169 IPR020845 -
Aip04g00217 581 SUPERFAMILY Acetyl-CoA synthetase-like 3 580 - -
Aip04g00217 581 Gene3D - 2 186 IPR042099 -
Aip04g00217 581 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 3 181 - -
Aip04g00217 581 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 181 581 - -
Aip04g00217 581 Gene3D - 187 430 IPR042099 -
Aip04g00217 581 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 181 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00217 Aip-Chr4 2495064 2505748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00217 3 581 Acyl Lipid Metabolism Gene Families AT3G23790 66.776 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00217 K01897 - gmx:100782583 954.125