Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00198 ATGGCCACGTGTATATCTGCTGTGAACTTGAATTACCAAATTGCCCCAAGAACCGTTTCGAAATTCAGTTCTGCGACGAGCTCGGACCAAACGGCGTCGTTTTCGCTTGGCGCGAGCGAGTCGATGGGACCGAGTCTCAGACTCGCTTTGACTCGTGCTGCTAAGAGCACCACCACCACCACCACTAGGTTGTTGAGGAAGAAGCATGGCTCTCTTCCGTTGCGAGTGTTTTGCGTCGATTACCCTCGGCCGGAGCTTGAGAACACCGTGAATTTCCTCGAAGCAGCGTTCTTGTCTTCGACTTTTCGTGATTCACCACGACCAGCGAAACCGTTGAAGGTCGTTGTTGCTGGAGCAGGATTGGCTGGTTTATCGACTGCAAAATATTTGGCAGATGCTGGTCACAAGCCTGTATTACTGGAGGCAAGAGATGTTCTAGGTGGAAAGGTTGCTGCATGGCAAGATGAAGATGGAGACTGGTATGAGACAGGCCTGCATATATTCTTTGGGGCATACCCTAATGTGCAGAATCTATTTGGAGAACTTGGTATTAATGATCGGTTACAATGGAAGGAACATTCTATGATTTTTGCAATGCCAAGTAAACCTGGAGAATTTAGTCGATTTGATTTTCCTGAAGCCCTACCAGCTCCACTAAATGGAATATTGGCAATATTGAGGAACAATGAGATGCTTACTTGGCCAGAAAAAGTCAAGTTTGCAATTGGGCTTCTGCCAGCTATGCTTGGTGGTCAGTCTTATGTTGAAGCTCAAGATGGCCTTTCTGTTAAAGATTGGATGAGAAAGCAGGGTGTACCTGATCGAGTAACTGATGAGGTGTTCATAGCCATGTCAAAGGCACTAAATTTCATCAACCCGGATGAACTTTCAATGCAATGTATATTGATTGCCTTAAACCGATTTCTTCAGGAAAAGCATGGTTCTAAAATGGCCTTTTTGGATGGTAATCCCCCTGAAAGACTTTGTATGCCTATTGTTGATCATATTCAATCCTTGGGTGGTGAAGTTCATCTAAATTCTCGCATTCAAAAGATCGATCTAAATGATGATGGCACTGTGAAGAGCTTCTTGCTAAATAATGGGAAGGTGATTGAAGGGGATGCTTATGTGTTTGCAACTCCAGTTGATATTCTGAAGCTTCTTGTGCCTAACAATTGGAAAGAGATTCCATATTTCCAAAGATTGGAGAAACTAGTAGGAGTCCCGGTTATAAATGTTCATATATGGTTTGACAGAAAACTGAAGAACACATATGATCATCTTCTCTTCAGCAGAAGTCCACTTTTGAGTGTATATGCTGACATGTCAGTAACTTGTAAGGAATATTATAACCCAAACCAGTCTATGTTGGAGTTGGTTTTTGCACCTGCTGAAGAATGGGTTTCTCGAAGTGATGAAGACATCATTGCTGCTACGATGTCTGAACTTGCCAAACTGTTCCCTGATGAAATTTGTGCAGACCAGACAAAAGCAAAGATTGTTAAGTACCATGTTGTTAAAACACCCAGGTCGGTTTACAAAACTGTTCCAAATTGTGAACCTTGTCGTCCCATACAACGATCTCCTATAGAAGGTTTCTATTTAGCTGGAGATTACACAAAACAAAAATATTTAGCTTCAATGGAAGGTGCTGTTCTGTCAGGGAAGCTATGTGCACAGGCTATTGTACAGGATTCTGAGCTACTTGCTGCTCGGAGCCAGAAAGCTGTGGCCCAAGCAAGTGTTATTTAA 1752 0.4304 MATCISAVNLNYQIAPRTVSKFSSATSSDQTASFSLGASESMGPSLRLALTRAAKSTTTTTTRLLRKKHGSLPLRVFCVDYPRPELENTVNFLEAAFLSSTFRDSPRPAKPLKVVVAGAGLAGLSTAKYLADAGHKPVLLEARDVLGGKVAAWQDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPEALPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAMLGGQSYVEAQDGLSVKDWMRKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGEVHLNSRIQKIDLNDDGTVKSFLLNNGKVIEGDAYVFATPVDILKLLVPNNWKEIPYFQRLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWVSRSDEDIIAATMSELAKLFPDEICADQTKAKIVKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLAARSQKAVAQASVI 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00198 583 PANTHER BNACNNG70650D PROTEIN 65 582 - -
Aip04g00198 583 Pfam Flavin containing amine oxidoreductase 121 562 IPR002937 GO:0016491
Aip04g00198 583 SUPERFAMILY FAD/NAD(P)-binding domain 110 564 IPR036188 -
Aip04g00198 583 Gene3D - 110 573 IPR036188 -
Aip04g00198 583 TIGRFAM phytoene_desat: phytoene desaturase 113 563 IPR014102 GO:0016117|GO:0016166
Aip04g00198 583 PANTHER PROTOPORPHYRINOGEN OXIDASE 65 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00198 Aip-Chr4 2218314 2224699 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00198 K02293 - gmx:547970 1001.89