Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00193 ATGCATATCTTCACTCCAACGCTTGCCTCAATCTCTTTTCTCTCAGTCTCACCTTCTTCACAACCAGACCTCCTCTACTGCACCACTACCACTTCTTATCGTTATCCTTTTAGTTTCCCAAAATGCCCCCACAAATTAACTGCAAAGACGCCTTGGGAGTGGCACCATAACTGTAATAACACAAGTAGAATATGCGTCTCTGGAAATAGTACCCAGATTGACCAAAACCCAGATGGTGGACTCCTTCATCAACGCCCTACTCTTTTGGAACCGCAGCTACAAGATGATGATCACATTCGTCAGGCCCGGAGATCGTCAGATTGGAAGGTTGCAAAGGAGCACAAAGAGAATGGAGTGATCCACAATGGTAGGATTGAAGGCTTTAATGCCGGAGGCCTCCTTGTTCGCTTTTATTCTATTGTCGGCTTTCTCCCATTCCCACAGCTCAGCCCAATCCATTCGTCCAAAGAACCACAGAAACCTATCCAAGATATTGCTAAAGGTTTGCATGGTTCAATCATATCAGTGAAGGTCATTCTAGCAGATGAAGATAAAAGAAAATTGATCTTCTCTGAGAAAGAAGCTTCTTGGTCCAAATATTCAGGGCAAGTCAAAGTAGGGGACATTTTCGAAGCAAGAGTTGGCTCTGTCGAGGACTACGGTGCATTCGTTCATTTGCGCTTCCCCGACGGTCTTTATCACCTTACCGGATTAGTACACATCTCAGAAGTATCATGGGATCTAGTTCAAGATGTAAGAGACATCTTAAAAGAAGGTGATCAAGTCAGGGTCAAAGTTATTGGTGTTGATAGAGAAAAATCAAGGATTACACTGTCAATTAAACAGTTAGAAGAAGATCCACTTCTAGAAACTCTGGACAAAGTAATACCACAGGATGGTATAGCTGATCCTGATTCTTCTAGTGACAGTGAAAGTAGTACTATTGAGCCTCTTCCGGGGCTTGAAGCTATCCTTGAAGAGCTCAAACAGGAGGATGGAATTTATGAAGCAAGAATAAGCCGTCAAGGATTTGAAAAACGGGTTGTCTCACAAGACTTGCAACTTTGGCTCTCTAATGCACCTCCAGTAAATCAAAGATTTACCCTCCTTGCTAGGGCGGGAAGACAGGTTCAGGAGGTACATTTGACAACGTCACTAGATCAGGAAGGTATCAAAAAGGCCTTACAACGAGTATTAGAACGTGTCCCCTAA 1212 0.434 MHIFTPTLASISFLSVSPSSQPDLLYCTTTTSYRYPFSFPKCPHKLTAKTPWEWHHNCNNTSRICVSGNSTQIDQNPDGGLLHQRPTLLEPQLQDDDHIRQARRSSDWKVAKEHKENGVIHNGRIEGFNAGGLLVRFYSIVGFLPFPQLSPIHSSKEPQKPIQDIAKGLHGSIISVKVILADEDKRKLIFSEKEASWSKYSGQVKVGDIFEARVGSVEDYGAFVHLRFPDGLYHLTGLVHISEVSWDLVQDVRDILKEGDQVRVKVIGVDREKSRITLSIKQLEEDPLLETLDKVIPQDGIADPDSSSDSESSTIEPLPGLEAILEELKQEDGIYEARISRQGFEKRVVSQDLQLWLSNAPPVNQRFTLLARAGRQVQEVHLTTSLDQEGIKKALQRVLERVP 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00193 403 Gene3D - 201 283 IPR012340 -
Aip04g00193 403 ProSiteProfiles S1 domain profile. 118 193 IPR003029 GO:0003676
Aip04g00193 403 Pfam S1 RNA binding domain 204 281 IPR003029 GO:0003676
Aip04g00193 403 Gene3D - 108 200 IPR012340 -
Aip04g00193 403 SMART S1_6 205 281 IPR022967 -
Aip04g00193 403 SMART S1_6 116 193 IPR022967 -
Aip04g00193 403 SUPERFAMILY Nucleic acid-binding proteins 205 294 IPR012340 -
Aip04g00193 403 ProSiteProfiles S1 domain profile. 207 281 IPR003029 GO:0003676
Aip04g00193 403 PANTHER OS03G0844900 PROTEIN 90 403 - -
Aip04g00193 403 SUPERFAMILY Nucleic acid-binding proteins 117 193 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00193 Aip-Chr4 2183504 2192246 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00193 - - ahf:112740919 800.045