Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00190 ATGGCTGCTGCTGTTAGAACTGTCTCCACCACCACCAAGGATAATAATTTGAAAGAGCACAAGAACAAGAATAACGTTGTTGATCAATGTGAAGAACATGATGCTGATGATGACAACAAGTGTTGTGAAACTGAAAAGGAATTGGATCTTGGTCCTCTGGTTAGCCTCAAGGAACACCTTGAGAAAGATAAAGATGATGAGAGTTTGAGAAAATGGAAAGAACAACTACTTGGAAATGTTGATGTATCTGCCGTTGGAGAAAGTAAAGATCCAGAAGTGAAGATTGTGAGACTGAGCATTACATCCCCAGACAGAGATGAAGACATAATATTGCCAATTCCATTCACAACTGAACCTAAAAAGACACTCTTTGTGCTTAAGGAAGGAAGCAAATTCCGAATGAAATTCACATTCACTGTCTCAAACAACATTGTCTCTGGTCTCAAATACACTAATGTTGTCTGGAAAGCTGGTGTTAGAGTGGACAGCAGAAATAGAATGTGTGGAACATTTAGTCCACAGCTTGAGCCATATGCATATGAATTGGAAGAAGAAACTACCCCTACTGGCATTTTTGCCAGGGGAACTTATGCATCAAGAACAAAGTTTATAGATGACGATCGAAAATGTTACTTGGATGTGAGTTACCACTTTGAAATTCGGAAGACTTGGGGAGGAAAATGA 684 0.3933 MAAAVRTVSTTTKDNNLKEHKNKNNVVDQCEEHDADDDNKCCETEKELDLGPLVSLKEHLEKDKDDESLRKWKEQLLGNVDVSAVGESKDPEVKIVRLSITSPDRDEDIILPIPFTTEPKKTLFVLKEGSKFRMKFTFTVSNNIVSGLKYTNVVWKAGVRVDSRNRMCGTFSPQLEPYAYELEEETTPTGIFARGTYASRTKFIDDDRKCYLDVSYHFEIRKTWGGK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00190 227 PANTHER OS01G0913600 PROTEIN 13 225 - -
Aip04g00190 227 MobiDBLite consensus disorder prediction 1 20 - -
Aip04g00190 227 Pfam RHO protein GDP dissociation inhibitor 35 222 IPR000406 GO:0005094|GO:0005737
Aip04g00190 227 Gene3D Coagulation Factor XIII, subunit A, domain 1 45 225 IPR024792 -
Aip04g00190 227 SUPERFAMILY E set domains 32 225 IPR014756 -
Aip04g00190 227 PRINTS RHO protein GDP dissociation inhibitor signature 83 98 IPR000406 GO:0005094|GO:0005737
Aip04g00190 227 PRINTS RHO protein GDP dissociation inhibitor signature 144 160 IPR000406 GO:0005094|GO:0005737
Aip04g00190 227 PRINTS RHO protein GDP dissociation inhibitor signature 161 176 IPR000406 GO:0005094|GO:0005737
Aip04g00190 227 PRINTS RHO protein GDP dissociation inhibitor signature 203 220 IPR000406 GO:0005094|GO:0005737
Aip04g00190 227 PANTHER RHO GDP-DISSOCIATION INHIBITOR 13 225 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00190 Aip-Chr4 2146022 2147940 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00190 K12462 - gmx:100797593 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00190 04 2146022 2147940 Aip04g00190 04 2146022 2147940 ECH
Aip04g00190 04 2146022 2147940 Aip03g04981 03 134497419 134499493 PCT