Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00155 ATGGGGAACTATGTTGTAACTAGCATACTCATTCTTCTCTTCAATTTGAGCACTCTAATCAACGTTGTCATCGCTTGTCCGTACTGTCCATACCCAACTCCAAAGCCTCCAAAGCACCACGAGCATCCAAAACTCCCACCGAAACAGCCTCCAAGAGTGAAGCCCCCAATTCACAAACCACCAAAGCACAATAAGCCTACTCCTACCACTCCATGTCCACCACCAAAGTCACCAAAACCAAGACCTCCCTATGTCCCCAAGCCTCCAGTAATAGTGCACCCACCCTACGTCCCAAAGCCACCATATGTACCAAAACCACCATATGTACCTAAGCCACCGGTTGTTAGACCACCATATGTACCAAAGCCACCGGTTGTAACTCCACCATATGTACCTAAGCCACCGGTTGTTACACCACCATATGTACCGAAACCACCGGTTGTAACTCCACCATATGTACCAAAGCCACCGGTTGTGACACCACCATATGTACCAAAGCCACCGGTTGTGACACCACCATATGTACCAAAGCCACCGGTGGTTACACCACCATATGTACCGAAACCGCCGGTTGTGACACCGCCATATGTACCAAAGCCACCAGTGGTTACACCACCTTATGTTCCTACACCATCACCACCATATGTACCAAAACCATCTCCACCAGTTGTGACACCACCTTACACACCAAGGCCGCCCATTATTGTTCATCCTCCGTACGTCCCGTTGCCACCAGTTGTACCCACACCGCCCATCATCTCACCTCCTCCATATGTACCGACGCCACCGGTGGTTACTCCACCAACGCCACCAAGTGAAACACCGTGTCCGCCACCGCCACCGCCGGCGCAACCAACATGCCCCATAGACTCGTTGAAGCTTGGTGCCTGTGTGGACGTTCTTGGCGGACTCATACACATCGGAATCGGAGGAAGTGCTAAACAAACATGCTGTCCGGTGCTTGAAGGGCTTCTGGACCTTGATGCTGCTGTGTGTCTCTGCACTACAATTAGGGCGAAGCTTCTCAACATCAACATTATCATCCCCATCGCCCTTCAGCTCCTCATTGATTGTGGAAAGACTCCGCCAGATGGATTCAAGTGCTCACCAAATTAA 1116 0.5099 MGNYVVTSILILLFNLSTLINVVIACPYCPYPTPKPPKHHEHPKLPPKQPPRVKPPIHKPPKHNKPTPTTPCPPPKSPKPRPPYVPKPPVIVHPPYVPKPPYVPKPPYVPKPPVVRPPYVPKPPVVTPPYVPKPPVVTPPYVPKPPVVTPPYVPKPPVVTPPYVPKPPVVTPPYVPKPPVVTPPYVPKPPVVTPPYVPKPPVVTPPYVPTPSPPYVPKPSPPVVTPPYTPRPPIIVHPPYVPLPPVVPTPPIISPPPYVPTPPVVTPPTPPSETPCPPPPPPAQPTCPIDSLKLGACVDVLGGLIHIGIGGSAKQTCCPVLEGLLDLDAAVCLCTTIRAKLLNINIIIPIALQLLIDCGKTPPDGFKCSPN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00155 371 Pfam Hydrophobic seed protein 286 369 IPR027923 -
Aip04g00155 371 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 194 369 - -
Aip04g00155 371 Gene3D - 284 370 IPR036312 -
Aip04g00155 371 MobiDBLite consensus disorder prediction 264 283 - -
Aip04g00155 371 PANTHER - 194 369 - -
Aip04g00155 371 MobiDBLite consensus disorder prediction 62 85 - -
Aip04g00155 371 MobiDBLite consensus disorder prediction 37 85 - -
Aip04g00155 371 CDD HPS_like 289 368 IPR027923 -
Aip04g00155 371 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 289 370 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00155 Aip-Chr4 1654538 1657721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g00155 277 368 Acyl Lipid Metabolism Gene Families AT4G22520 34.737 1.59e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00155 - - lja:Lj0g3v0200859.1 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00155 04 1654538 1657721 Aip07g02349 07 97906938 97910632 PCT