Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04957 ATGCAATATTTATCTATGGATTGGCAAGGACAAAAGCTAGCAGAGCAGCTGATGCAGATATTGCTGCTTGCCTTTGCTGTGGTTGCATTCACAACTGGATACTTTACGGCTTCTTTCCAATTGATGATCCTCACATATTTTGGTGGTGTGGTTCTCACTACATTGGTGACCGTCCCTAATTGGCCCTTCTACAATCGCCATCCTCTCAAGTGGTTGGACTCAAGCGAGGTAGAAAAGCATCCGAAGCCACAGCCGTCGGCAAACTCAACTTCAAAGAAGAAACCTGTTAAGAAGTAA 297 0.4478 MQYLSMDWQGQKLAEQLMQILLLAFAVVAFTTGYFTASFQLMILTYFGGVVLTTLVTVPNWPFYNRHPLKWLDSSEVEKHPKPQPSANSTSKKKPVKK 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04957 98 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 6 75 IPR009542 GO:0005787|GO:0006465|GO:0016021
Aip03g04957 98 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 5 94 IPR009542 GO:0005787|GO:0006465|GO:0016021
Aip03g04957 98 MobiDBLite consensus disorder prediction 75 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04957 Aip-Chr3 134166795 134167435 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04957 K12946 - gmx:100526911 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04957 03 134166795 134167435 Aip03g04957 03 134166795 134167435 ECH