LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g04952	ATGACCGGAAGCGGAAGAAGAACCACTCGGAGCAGAGCCAGATCCTCCGCCGATCCTGACGGCGGAGACGACGATGCCTCACTCCGGGAAGCGAAGTTGAAGCTGAAGCGTCGGAGAGAGAGGAGCAAGTACGGAAGTGCGATTCCGCTATTCAACAATCCGAACCTGAAGGTGGTGCTCCTTATCACCGTGGTGGCATTCTTCGTAATCTTGTTTCTGATCTTTCACCTTGTCAATTCCACCGCCGAACCCGAGCTCCCTCGCGCCGTCACGCCGCTTCCTGCCCCCAAGATTATGGACCTTCCTCAGTTTCAAGGTGAACACAGGGAGAGTTTGTATTGGGGAACTTATCGTCCCCATCTTTATCTTGGAATTCGTGCCAGGACTTCACAGTCTTTGATGGCTGGATTGATGTGGATTGGTGTGAAGGATGGAAGGTATCACTTGCGACATGTCTGCAAAGATGAGGATGATCTTGGCACTTATGGTTGGACAAAGCATGATGGACGTGAATTCGGGCATCAGTTGCTGGCAGATCATGGCATGACTTTGGCTACTGAGTTTTTAAAATCAAAGGTGGGTGGCAGTGGTTACGGAGGGGATTGGGCAGTTCGAATTAGTGTGCACATCAATAAGTCTGAGTGGAACGAGGAGTTTGGGAAAGGTGCCCAGCTTTTCTTCTATTTGGCTGATGAAGGTGGTAATGTTCTGGATCTAAGTAGAGAAAAGTTGAACATTCATGAGGATTCTTTGCTTGCATCTGGCTCTCGACTGGATATTGGAAATTGGCAGCTGCATTTAAAATCAACGGATGATTTAGAGCTGCATTATTCTGGATTTCGCACCCCTCACTTTCATAATTTATCTGATCTTGTTGAGGAAAATCTTGCATCACAAATAAGAAACCATGCTCGATTACAGCTGTCTGACTCATCAGTTGATTCTCCAAATGTGTTAGTTTTTCAGATTATCGGTGGATTTCCTTTCACAACAGATATTGCACTTCTTTCTGGAACTGATTCGGAAAGCTCAAGAGTAGACGAGCGTGTTAGTCAGTTAACAGGCACCTCATTGACCAGTCAACTGAATGATAAGAAACAAGCATTTGACAAAAAGTTTGAAGATGTTTTCAGTTTGGCTGAGAAGGTGGATTCAGAATCCATATCTGTTGGTAAGGCTGCTGTAGGGAACTTGTTAGGTGGCATTGGTTACTTTTATGGGCAGTCAGTAATTGCAATTCCGAGAACCCTCGATCTTAAAGAGCATGTTAAGTATGTATCATATTGGCCTGCTGAGCTTTATACAGCTGTACCAGGTCGATCTTCCTTTCCAAGAGGATTTTTATGGGATGAAGGCTTTCATCAACTTCTAATCTGGCGTTGGGATATTCATATTTCGTTGGATATCATTGGACACTGGTTAGATTTGATGAATGTTGATGGATGGATACCTCGTGAACAAATTCTGGGAGCCGAAGCGCGAAGTCGGGTCCCAGAGGAATTTGTTCCGCAGCATCCAACAAATGGAAATCCTCCAACTCTGTTTTTAGCATTGAATGATATAGTTAACGGCTTGAAGACCAACAAGTTTAATGCAAACGATAGAAGTGATATATCTCTGTTCCTAGAGCGTGCCTTTGTTAGATTGGAAGCATGGTTCCAATGGTTTAATACAACTCAGTCAGGGAATCAGATGGGCAGCTACTACTGGCATGGACGGGACAATAAAACAATACGAGAATTGAATCCCAAGACACTGTCCTCAGGATTGGATGATTATCCACGTGCTTCCCACCCAAGTGGAGATGAGCGCCACTTGGATCTTAGGTGTTGGATGTCACTTGCAGCAGATTGCATGCATTCCATTGAAGAGCTGTTAGATAAGGAAACCAAACCTAGTAAGAATTATGGTTCTACAGCTAAGTTGCTATCAGATCTTGAGTTAATAAACCAGATGCATTTTGATGTTGCATATGGTGCGTACTTTGATTTTGGAAATCATACAGAGAAGGTTCAACTTAAATGGAAAGAAGTGGCGGTTGGACATAATCAAGCTGCTCGTGAGCTTGTCCGGGAAGTTTTCGAGAGACCCAAGTTGAGATTTGTTCCCCACATTGGTTATGTGAGTTTATTCCCGCTCATGACAAGGATCATTCCATCAGGATCATGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGAAGCCTCTTGTGGACTGACTATGGACTACGTTCTCTTGCCAAAACAAGTTCCATGTACATGAAACGCAACACAGAACATGATGCTCCATATTGGAGAGGTACAATTTGGATAAACATGAATTACAGAATTCTTTCAGCACTCCACCATTACTCGAAAGAGAATGGCCCGTATCAGGACAGAGCTAAAGCTATCTACGAAGAATTGAGAAGCAATTTAATTAGAAATATAGTACGCAATTATCGACAGAGTGGATATCTGTGGGAACAGTATGATCAGGTTAAGGGTAAGGGAAAAGGGGTACACCCATTTACGGGTTGGACATCACTTGTGACATTAATCATGGCAGAGGCTTATGAAAAGATTTAG	2571	0.4368	MTGSGRRTTRSRARSSADPDGGDDDASLREAKLKLKRRRERSKYGSAIPLFNNPNLKVVLLITVVAFFVILFLIFHLVNSTAEPELPRAVTPLPAPKIMDLPQFQGEHRESLYWGTYRPHLYLGIRARTSQSLMAGLMWIGVKDGRYHLRHVCKDEDDLGTYGWTKHDGREFGHQLLADHGMTLATEFLKSKVGGSGYGGDWAVRISVHINKSEWNEEFGKGAQLFFYLADEGGNVLDLSREKLNIHEDSLLASGSRLDIGNWQLHLKSTDDLELHYSGFRTPHFHNLSDLVEENLASQIRNHARLQLSDSSVDSPNVLVFQIIGGFPFTTDIALLSGTDSESSRVDERVSQLTGTSLTSQLNDKKQAFDKKFEDVFSLAEKVDSESISVGKAAVGNLLGGIGYFYGQSVIAIPRTLDLKEHVKYVSYWPAELYTAVPGRSSFPRGFLWDEGFHQLLIWRWDIHISLDIIGHWLDLMNVDGWIPREQILGAEARSRVPEEFVPQHPTNGNPPTLFLALNDIVNGLKTNKFNANDRSDISLFLERAFVRLEAWFQWFNTTQSGNQMGSYYWHGRDNKTIRELNPKTLSSGLDDYPRASHPSGDERHLDLRCWMSLAADCMHSIEELLDKETKPSKNYGSTAKLLSDLELINQMHFDVAYGAYFDFGNHTEKVQLKWKEVAVGHNQAARELVREVFERPKLRFVPHIGYVSLFPLMTRIIPSGSWILEKQLELISNRSLLWTDYGLRSLAKTSSMYMKRNTEHDAPYWRGTIWINMNYRILSALHHYSKENGPYQDRAKAIYEELRSNLIRNIVRNYRQSGYLWEQYDQVKGKGKGVHPFTGWTSLVTLIMAEAYEKI	856

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g04952	856	Gene3D	-	381	855	IPR012341	GO:0005975
	Aip03g04952	856	PANTHER	ALPHA-GLUCOSIDASE 2	83	854	-	-
	Aip03g04952	856	SUPERFAMILY	Six-hairpin glycosidases	365	853	IPR008928	GO:0005975
	Aip03g04952	856	Pfam	Glycosyl hydrolase family 63 N-terminal domain	111	272	IPR031631	-
	Aip03g04952	856	PANTHER	MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE	83	854	IPR004888	GO:0004573\|GO:0009311
	Aip03g04952	856	MobiDBLite	consensus disorder prediction	1	28	-	-
	Aip03g04952	856	Pfam	Glycosyl hydrolase family 63 C-terminal domain	354	851	IPR031335	-
	Aip03g04952	856	Gene3D	-	99	380	IPR038518	-
	Aip03g04952	856	MobiDBLite	consensus disorder prediction	11	28	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip03g04952	83	853	Glycoside Hydrolase	AT1G24320	58.420	0.0	958

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g04952	K01228		-	gmx:100795691	1401.34

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip03g04952	03	134140470	134148586	Aip03g04952	03	134140470	134148586	ECH