Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04937 ATGGCTTCTCCATCATGCTTCCCTCTTCGTTGGGAGAGCACAGGAAACCAGTGGTGGTATGCAGCCCCCATTGATTGGGCTGCAGCAAATGGCCTCTATGATCTTGTTGCTGAGCTTCTCCACCTTGACACCAACCTCCTCATCAAGCTCACTTCCCTCCGTAGAATTCGCCGCCTCGAAGCCGTTTGGGATGACGAGGCTAACTTTGAAGACGTTGCAAGTTGCCGCTCCAAGGTTGCAAGGAATCTCATGCTTGAATGTGAGAACGGAAGAAGGGAACACAAGTACAACTCCCTCATCCGTGCTGGCTATGGTGGATGGCTTCTCTACACTGCAGCCTCAGCAGGGGATGTGGAATTTGTGAAGGAATTGTTGAGTAGAGACCCTTTGCTTGTTTTTGGTGAGGGAGAGTATGGTGTCACTGACATACTCTATGCTGCTGCAAGGAGCAAGAATTGTGTGGTGTTCAGGCTCTTGCTTGATTCTGCACTCTCTGGGAGTGAAGAACATCATGGTGATGGTGGTGTTTTCAAGAGAGAGATGGTGAATAGAGCAATTCATGCTGCTGCAAGAGGAGGGAATTGGGAAATGCTGAAGGAGCTTGTGGAAAATGTTTCTGAGATTTTGTGCTACAGAGATTCTCAAGGGTGTACTGTCTTGCATTCAGCAGCTGGCAGAGGCCAAGTTGAGGTAGTGAGAAACTTAATTGAGTCATCTGATATTATCAACTCAACTGATGTACAAGGCAATACAGCATTACATGTGGCTTCTTACAGGGGTTACTTACCTGTGGTAGAGATTCTGGTTCAAGCATCACCCTCATTAGCATCCCTAACCAATCATTATGGAGATACTTTTCTTCACATGGCAGTGGCTGGTTTCAGAAGCCCTGGATTCCGAAGACTAGACAAGCACACTGAGCTCATGAACCAATTGATTAGTGGAAAGATTGTGGACATGCAGGACATCATAAATATCAAGAACAATGATGGAAGAACAGCTCTTCATGTAGCTGTGATTCATAACATCCAATGTGAAATAGTGGAATTACTGATGTCTATTCCATCAATTGATTTGAACGTCCGCGATGCGGATGGCATGACCCCCTTGGATCATTTGAAGCAGAGGTCACAATCAGCATCATCTGAAATCTTGATCAAGCAGTTGATTTCAGCCGGTGGCATCTCTAATTGTCAGGATTATACAGCAAGAAATACTCTTGTTACTCATCTGAAGAATCATGGCATTGTAACAAGTCCTGGCATTTCATTCAGGGTACCAGATGGTGAGATATTCTTGTACACAGGCATTGAGAAATCCTATGATGACAATTTTGATCAGGCAAGTGTGGAATCAAATTCATGGTCAAGTGGTGAACCGCATGATTACAAGCTAGCCGATTCTCCACATTGCAGCAAGTCTAGTCCTATCAACGATGCGAAAAGGCGCTTAAAGTTCCTTTTCGGGAGGCCTAGAGGAAGAGAGACTAAAAAGGCAGTATCAGAAATTCAAGATGACGATTCTGTGGCTGCTTCTTGCATCTCAAGTAAAGAGTTGGAAGACATTCCAATTCCATTAAGACAAAGATACTCAAAACTGTGTTCCCTTCCAAACAACAAGAGAACATTACCTATAATGACCAATCTCCCAAGTCCATCCAGTAGAAGTTATTTTGCTGCAGGCCTAATGCAAGGGGTAATTCAGGTAAAGCCATATGTGCCTATTGCTAATGCTGCTGCTCATTCAACTCAAAGTCTTCAAGAACATAAGGGTGTTGATATAGATTGTGGTACACGACAGTTGAACTTCAGGCAGGGTTCCTTCAATAAGAAAATGATGAATAAGTATTTTTCTTTTGGAGCACAAGAGCAGGCTTTTGAGGGTGCAAATAGCTGCACTAGGACAAATCTCAGTTCTTTAGTTACATAA 1929 0.4386 MASPSCFPLRWESTGNQWWYAAPIDWAAANGLYDLVAELLHLDTNLLIKLTSLRRIRRLEAVWDDEANFEDVASCRSKVARNLMLECENGRREHKYNSLIRAGYGGWLLYTAASAGDVEFVKELLSRDPLLVFGEGEYGVTDILYAAARSKNCVVFRLLLDSALSGSEEHHGDGGVFKREMVNRAIHAAARGGNWEMLKELVENVSEILCYRDSQGCTVLHSAAGRGQVEVVRNLIESSDIINSTDVQGNTALHVASYRGYLPVVEILVQASPSLASLTNHYGDTFLHMAVAGFRSPGFRRLDKHTELMNQLISGKIVDMQDIINIKNNDGRTALHVAVIHNIQCEIVELLMSIPSIDLNVRDADGMTPLDHLKQRSQSASSEILIKQLISAGGISNCQDYTARNTLVTHLKNHGIVTSPGISFRVPDGEIFLYTGIEKSYDDNFDQASVESNSWSSGEPHDYKLADSPHCSKSSPINDAKRRLKFLFGRPRGRETKKAVSEIQDDDSVAASCISSKELEDIPIPLRQRYSKLCSLPNNKRTLPIMTNLPSPSSRSYFAAGLMQGVIQVKPYVPIANAAAHSTQSLQEHKGVDIDCGTRQLNFRQGSFNKKMMNKYFSFGAQEQAFEGANSCTRTNLSSLVT 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04937 642 ProSiteProfiles Ankyrin repeat profile. 248 280 IPR002110 GO:0005515
Aip03g04937 642 ProSiteProfiles Ankyrin repeat region circular profile. 215 246 - -
Aip03g04937 642 SMART ANK_2a 19 48 IPR002110 GO:0005515
Aip03g04937 642 SMART ANK_2a 282 322 IPR002110 GO:0005515
Aip03g04937 642 SMART ANK_2a 215 244 IPR002110 GO:0005515
Aip03g04937 642 SMART ANK_2a 330 361 IPR002110 GO:0005515
Aip03g04937 642 SMART ANK_2a 104 133 IPR002110 GO:0005515
Aip03g04937 642 SMART ANK_2a 248 277 IPR002110 GO:0005515
Aip03g04937 642 SMART ANK_2a 181 210 IPR002110 GO:0005515
Aip03g04937 642 SMART ANK_2a 365 398 IPR002110 GO:0005515
Aip03g04937 642 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 3 636 - -
Aip03g04937 642 Pfam Ankyrin repeats (many copies) 242 290 IPR002110 GO:0005515
Aip03g04937 642 Pfam Ankyrin repeat 330 363 IPR002110 GO:0005515
Aip03g04937 642 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 3 636 - -
Aip03g04937 642 Gene3D - 14 416 IPR036770 -
Aip03g04937 642 ProSiteProfiles Ankyrin repeat region circular profile. 248 270 - -
Aip03g04937 642 ProSiteProfiles Ankyrin repeat profile. 215 247 IPR002110 GO:0005515
Aip03g04937 642 SUPERFAMILY Ankyrin repeat 108 386 IPR036770 -
Aip03g04937 642 Pfam Ankyrin repeats (3 copies) 185 240 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04937 Aip-Chr3 133990647 133994046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04937 81 371 Miscellaneous Gene Families AT1G07710 29.592 5.38e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04937 - - gmx:100811195 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04937 03 133990647 133994046 Aip03g04937 03 133990647 133994046 ECH