Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04932 ATGGATGCTTGCCTAGATATCTACCAGAAGCTCCAAAATTCCAAGATTGATAACTTGGAAATAAATTGTGTTGCCAGCCTAGTTATGGGCGGGAGGTCATCCGAAGTTCAAGGACTTCTGGATTCACTTCGGGTTAAAGCAACAAGTAGCTTTGAATTGGCATACAATACTGCTTGTTCTTTAATTGAAAGGAAGAAGTACACAGATGCAGAACAACTCCTGTTGTCAGGCCGAAGAATTGGTCAAGAGGTCCTGATGGAAGATAATTTGCCTGATGATGAGATAGAAAGTGAATTGGCTCCTCTAGCTGTACAATTGGCCTATGTCCAGCAGCTTCTTGGGTGTAAACAAGATGCTATTGAAGCTTATATAGACATCATTAAACGAGATATGGCTGATGAATCATCAATTGCAGTGGCAGTGAACAATCTTGTTTCACTGAGAGGTCCAAAAGATGTTTCTGATAGCCTAAGGAAACTTGATCGGCTCAAAGACAAAGAGGCACAGAACTTTCGGCTAGCTAGTGAACTAGACTTGAAACTTCCAGCAAAAGAAAAGGAAGCGATATATGCAAATAGGGTCCTTTTACTTCTTCATGCCAATAAGATAGACCAGGGCCGAGAACTTGTTTCCAGATTGCCAGACATGTTTCCAGAAAGTGTGATACCTATATTGCTGCAAGCTGCTGTCCTAGTTAGAGAGAACAAAGCTGGAAAGGCGGAGGAATTATTAGGACAGTTTGTTGGGAAGTACCCTGAGAAGTCCAAGGTTGTTCATTTGGCCAGGGCTCAGGTGGCTGCTGCTGCTGGTCACCCACATATTGCAGCTGATTCCGTGGCTAAGATATCAGATATCCAACACATGCCTGCTACTGTTGCCACCCTTGTCTCTTTAAAAGAACGTGCTGGTGACATTGAGGGTGCATCTGCTGTGCTTGATTCTGCTATCAAATGGTGGTCTAATGCTATGACTGAGGACAATAAGCTTAATATTATAATGCAAGAGGCTGCTTCATTCAAGATCAGGCATGGCAATGAAGATGATGCTGCTAAACTCTATGAGGAGCTAGTTAAAAGCCAAGGAGGCATAGAAGCACTGGTTGGGCTGGTAACAACAGTTGCACGCACAGATGTCGATAAGGCAGAACTTTATGAAAAGCAACTGAAGGCCTTACCTGGTTTAAAGGGGATCGATGTGGACAGCTTGGAGCGAACTTCTGGAGTGAAACAGGTTGATGGTCCTGCTCATGTTGGGGTCACTGAATCACATGAGGAAGGAAAGAATAAGACAAAAGCTAAGAAAAAGAGAAAGAGAAAACCAAGGTATCCAAAAGGGTTTGACCCCGCAAATCCAGGTCCTCCCCCGGATCCTGAAAGGTGGCTCCCCAGGCGGGAGAGATCAACCTATAGGCCCAAGAGGAAGGACAAAAAAGCTGCTCAAGTGAGAGGCGCTCAGGGTGCTGTAGTCCGAGAAAAGCATGATGTTGGTTCTTCTTCCAACAACTCTAATCCGAAAGCAAGCCCGGCTGCTGCCTCTAAAGGAAGTAGTGGACCTTCTCAGCAAAGCAAGCCTTCATCCAAGTCAAGAAAGAAGTCAAGGAATTAA 1605 0.4467 MDACLDIYQKLQNSKIDNLEINCVASLVMGGRSSEVQGLLDSLRVKATSSFELAYNTACSLIERKKYTDAEQLLLSGRRIGQEVLMEDNLPDDEIESELAPLAVQLAYVQQLLGCKQDAIEAYIDIIKRDMADESSIAVAVNNLVSLRGPKDVSDSLRKLDRLKDKEAQNFRLASELDLKLPAKEKEAIYANRVLLLLHANKIDQGRELVSRLPDMFPESVIPILLQAAVLVRENKAGKAEELLGQFVGKYPEKSKVVHLARAQVAAAAGHPHIAADSVAKISDIQHMPATVATLVSLKERAGDIEGASAVLDSAIKWWSNAMTEDNKLNIIMQEAASFKIRHGNEDDAAKLYEELVKSQGGIEALVGLVTTVARTDVDKAELYEKQLKALPGLKGIDVDSLERTSGVKQVDGPAHVGVTESHEEGKNKTKAKKKRKRKPRYPKGFDPANPGPPPDPERWLPRRERSTYRPKRKDKKAAQVRGAQGAVVREKHDVGSSSNNSNPKASPAAASKGSSGPSQQSKPSSKSRKKSRN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04932 534 SUPERFAMILY TPR-like 53 358 IPR011990 GO:0005515
Aip03g04932 534 MobiDBLite consensus disorder prediction 494 525 - -
Aip03g04932 534 MobiDBLite consensus disorder prediction 405 534 - -
Aip03g04932 534 Pfam SRP72 RNA-binding domain 423 471 IPR013699 GO:0006614|GO:0008312|GO:0048500
Aip03g04932 534 Gene3D Tetratricopeptide repeat domain 6 390 IPR011990 GO:0005515
Aip03g04932 534 PANTHER SIGNAL RECOGNITION PARTICLE 72 1 532 IPR026270 GO:0006614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04932 Aip-Chr3 133911625 133914961 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04932 K03108 - gmx:100810125 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04932 03 133911625 133914961 Aip03g04932 03 133911625 133914961 ECH