Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04577 ATGGAAGCTTCACTTAAGAACAAAAGATACAAAAAGATTATTGTTTCATCCCCCACAAACACTACTATTCAACGTTGCTATGCTTGCAAAAATGTTTGTAATAGTTCTCAGCCTAGTGCAGAAGCAAGGTTCTTTTGCAGATGGTGTAAATCTGAGTGTGTAAGTGTAGTTACTTCAAGAACAACTCCATACCTATGTTCTACATGCCACAATGTTAGTATTCCAACTCTGGGACAAGAGAAATCCAGGGAAGTGTGTGGAATATGCAGCCAAGTGAAGAAAATTGGAACAAAATTTTTCAAACATGGTTATCCGGATAATCGAAACAAAATTGGAACTTTGCTAAGCAGAGAAGCACCATCTTCAAAGGCTTTATCTTCCTCCTCATCATCCTTCCCAGGCAGACATAGCAAGCGTGCAGTTCTCTGTGGAGTTTCTTACACAAAAATGAAATTCAAGCTCAAGGGAACCGTTAATGATGCTAACAACATGAGGGAGTTGCTGATTAAGAATTTCAAGTTTCCAAATGAGTGCATAAGAGTCCTCACAGAACAAGAGAAGAATGCTGATTTAATACCAACAAAACATAACATCATGGAGTCCTTAAGGTGGCTTGTGAAGGACTGCCAGGCAGGAGACTCCTTGGTCTTTTACTTCTCGGGGCACGGCCTGCAACAACCGGATTTCAAAGAAGATGAGATTGATGGCTTTGATGAAGCTCTCTGTCCGGTTGATTTTATCAAAGAAGGAATGATCATTGACAATGATATAAATTCTACCATTGTTTGGCCTCTCAAGAGTGGTGTCACACTCCATGCCATTGTTGATGCCTGTCACAGTGGAACCATTCTTGATCTTCTCTATGTTTATAATCTTGAAAGGAACATTTGGGAGGATAACAAGCCACCATCAAAGGAACCTATCAGAAAACATACAAGTGGGGGAGTGGCAATTTGTCTCAGTGCATGTGAAGATAGCCAATCAGCTAATGATAGCACAGTCTTTGGTGGAAAAGGAATGAACGGTGTTCTTACTTATCTTCTCGCAAAGGCAATAAGGGAACACCCTCAAATAACTTATGGGGCATTACTAGACAAGTTACAGATTGAAATTAAAAAGATTAATAGAAGTAGATGCCGTAGCAGCATCTTGCAACGTATCTTCCATCGAAAAATTGTACAGGATCCCCTTCTCTCATCATCAGAGAAATTTGATGTTTCTACAAAAATATTCGCATTGTGA 1242 0.3969 MEASLKNKRYKKIIVSSPTNTTIQRCYACKNVCNSSQPSAEARFFCRWCKSECVSVVTSRTTPYLCSTCHNVSIPTLGQEKSREVCGICSQVKKIGTKFFKHGYPDNRNKIGTLLSREAPSSKALSSSSSSFPGRHSKRAVLCGVSYTKMKFKLKGTVNDANNMRELLIKNFKFPNECIRVLTEQEKNADLIPTKHNIMESLRWLVKDCQAGDSLVFYFSGHGLQQPDFKEDEIDGFDEALCPVDFIKEGMIIDNDINSTIVWPLKSGVTLHAIVDACHSGTILDLLYVYNLERNIWEDNKPPSKEPIRKHTSGGVAICLSACEDSQSANDSTVFGGKGMNGVLTYLLAKAIREHPQITYGALLDKLQIEIKKINRSRCRSSILQRIFHRKIVQDPLLSSSEKFDVSTKIFAL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04577 413 PANTHER METACASPASE-4 65 412 - -
Aip03g04577 413 Gene3D - 87 413 - -
Aip03g04577 413 SUPERFAMILY Caspase-like 141 376 IPR029030 -
Aip03g04577 413 Pfam Caspase domain 138 402 - -
Aip03g04577 413 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 65 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04577 Aip-Chr3 130080883 130083175 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04577 K22684 - gmx:100796640 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04577 03 130080883 130083175 Aip10g00802 10 9750622 9752146 PCT