Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04520 ATGGATCCAGTGGGAGAGAAGAAATGGGGAGATATTTTGTCATGGATTGCAATATCAACGACGCTCGTTATTGCAGTTGTGGATGGTAGAGAGTGCAGTTTTCCGGCCATATTCAACTTAGGGGACTCCAATTCAGACACGGGTGGCCTCACAGCAGCTTTTGGGCCTGCTCCGCCCCCCAATGGAATCACTTTTTTCCACTCCCCTGCCGGACGCTTCTCCGACGGTCGCCTCATCATTGATTTCATAGCTCAAAGCTTTGATTTGCCTTATCTGAGTGCTTACCTGGACTCTGTCGGCTCAAACTTCACTCACGGAGTGAATTTCGCAACCGCCGGATCCACTGTCAGACATCAGAATACCACGTTGTTTCAGAGTGGATATAGCCCCATCTCCCTTGATGTTCAGTCTGTGCAGCTCTCTGATTTCAAAGCAAGATCCAAACTGGCTCGCAAGCGAGGAAGCGTGTTTAGGGAATTGTTGCCCAAGGAGGAGTACTTTTCTGAGGCTTTATACACCTTTGACATTGGCCAAAATGATATCACTGCTGGCTACAAGCTAAATATGACCTCAGAGCAAGTGAAGGCATATGTACCTGATGTTTTGACCCAGTTCTCCAATGTCATAAGGAATGTGTATGAGGAAGGTGGAAGGTCGTTTTGGATCCACAACACAGGCCCACTCGGATGCCTACCTTACATGCTCGATCGCTATCCAATGAGTTCAGATCAAATAGACAAATCTGGATGCGCCAAACCCTTCAACCAGGTTGCACAGTATTTTAACCGCAAATTGAAAGACACGGTTATGCAGCTGAGGAAGCAGCTGCCCGAGGCAGCAATCACCTATGTTGACGTGTACAGAGTGAAGTACAGTCTCATAAGCAATGCCCAAAAATACGGTTTCAAGGATGGGGTGATAGCATGCTGTGGGCAGGGAGGGAAGTACAACTACAATAACGCTGCAAGATGTGGCGCCACCAAGGTCGAGAATGGAAAGAAGGTGCTGATCGCCAAGTCCTGCAAAGATCCAAGTGTCAGAATTATTTGGGATGGGATCCATTACACTGAAGCTGCCAATTACTGGATCTTCCAACAAATTGCCAATGGATCCTTTTCAGATCCACCCCTGCCTTTAAATATGGCTTGTGAATTTTGA 1158 0.4732 MDPVGEKKWGDILSWIAISTTLVIAVVDGRECSFPAIFNLGDSNSDTGGLTAAFGPAPPPNGITFFHSPAGRFSDGRLIIDFIAQSFDLPYLSAYLDSVGSNFTHGVNFATAGSTVRHQNTTLFQSGYSPISLDVQSVQLSDFKARSKLARKRGSVFRELLPKEEYFSEALYTFDIGQNDITAGYKLNMTSEQVKAYVPDVLTQFSNVIRNVYEEGGRSFWIHNTGPLGCLPYMLDRYPMSSDQIDKSGCAKPFNQVAQYFNRKLKDTVMQLRKQLPEAAITYVDVYRVKYSLISNAQKYGFKDGVIACCGQGGKYNYNNAARCGATKVENGKKVLIAKSCKDPSVRIIWDGIHYTEAANYWIFQQIANGSFSDPPLPLNMACEF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04520 385 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 22 384 - -
Aip03g04520 385 Pfam GDSL-like Lipase/Acylhydrolase 37 367 IPR001087 GO:0016788
Aip03g04520 385 Gene3D SGNH hydrolase 28 371 IPR036514 -
Aip03g04520 385 CDD SGNH_plant_lipase_like 35 371 IPR035669 -
Aip03g04520 385 SUPERFAMILY SGNH hydrolase 39 369 - -
Aip03g04520 385 PANTHER BNAA06G32900D PROTEIN 22 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04520 Aip-Chr3 129476817 129478568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04520 35 381 Acyl Lipid Metabolism Gene Families AT4G10950 28.412 2.72e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04520 - - gmx:100803899 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04520 03 129476817 129478568 Aip03g04520 03 129476817 129478568 ECH