Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04508 ATGCATCTAGAGGCGGAGACTTGGACAGCGTTGGTTGTGATATTGTGTTTCCTTGGTTTGATTCTGAAGGAGTCAATTATGGGAGGTAAGAGTTCAAGAGAATCTGGCGGTGATAGGAGGCATGTGCCATCGTACGGTTCTGGTGGTGCTTCATCTTCATCTTGGGACAATTATGGATACTCGCAACCGCCACCGTATGCATATCAACCGTCAATTCAACACCGGCCACCCGCCGCTCCGTATTACGACTATCAACAGCCGAAAAGGAGGTTGGATAGGAGATATTCCAAGATTGCTGATAATTACCGTTCACTCGACGAGGTTACTGCTGCTCTTTCACAAGCTGGCCTAGAATCTTCTAATCTCATTGTCGGCATTGATTTCACAAAAAGCAATGAGTGGACAGGAAAGAGATCATTCAACCGAAAAAGTTTACATCACCTCGGAAATGGCCATAATCCTTATGAACAGGCGATCTCCATTATTGGGACAACTCTATCTGCCTTTGACGAGGATAACTTGATTCCATGTTTTGGATTCGGAGATGCATCAACACATGATCAAGATGTCTTCAGTTTCTACCCAGATGATAGATTCTGCAATGGATTTGAGGAAGTTTTGTCAAAATACAGAGAAATTGTTCCTCGTCTCAAACTAGCAGGACCCACTTCTTTTGCACCTATTATTGAGATGGCAATGACTATTGTTGAGCAAAGTGGTGGCCAATATCATGTCTTGCTAATAATTGCTGATGGACAGGTGACCAGAAGCGTTGACACAGAGCGTGGCCAGTTAAGTCCACAGGAACAGAAGACAATTGATGCAATTGTAAAAGCCAGTGAGTATCCACTGTCAATAGTTTTGGTGGGAGTTGGAGATGGACCATGGGATATGATGAGGGAATTTGATGATAACATCCCTACTAGATCATTCGACAATTTTCAGTTTGTGAATTTTACTGAAATAATGTCAAAGAATGTAGATTCAGAAAGGAAAGAGACAGAGTTTGCTCTATCAGCTCTGATGGAGATACCTTCTCAATATAAGGCAACCATAGACCATGGCATATTGGGTGCTCGGAGGGGATATTCACCGGACAGGGTTGCTTTACCTCCACCTCAATATGACAGGGCTTCCAGCAGCAACAACATATCTTTTCGCAGTAATAGTTTTCAGCAGAGTACTCCTTCGCATACTGGCTATGATAATGCAGTTAGTACCAGTGCAGAATCATCACCGGGTGGCTTATATGATCATAAGCTTTGTCCAATTTGTCTTACTAATGGGAAGGATATGGCCTTTGGTTGTGGGCATCAGGAGCACAATCGATACTAG 1335 0.433 MHLEAETWTALVVILCFLGLILKESIMGGKSSRESGGDRRHVPSYGSGGASSSSWDNYGYSQPPPYAYQPSIQHRPPAAPYYDYQQPKRRLDRRYSKIADNYRSLDEVTAALSQAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHHLGNGHNPYEQAISIIGTTLSAFDEDNLIPCFGFGDASTHDQDVFSFYPDDRFCNGFEEVLSKYREIVPRLKLAGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTERGQLSPQEQKTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPTRSFDNFQFVNFTEIMSKNVDSERKETEFALSALMEIPSQYKATIDHGILGARRGYSPDRVALPPPQYDRASSSNNISFRSNSFQQSTPSHTGYDNAVSTSAESSPGGLYDHKLCPICLTNGKDMAFGCGHQEHNRY 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04508 444 Pfam Copine 144 357 IPR010734 -
Aip03g04508 444 MobiDBLite consensus disorder prediction 367 413 - -
Aip03g04508 444 MobiDBLite consensus disorder prediction 29 54 - -
Aip03g04508 444 PANTHER COPINE FAMILY PROTEIN 1 27 440 - -
Aip03g04508 444 SUPERFAMILY vWA-like 121 304 IPR036465 -
Aip03g04508 444 MobiDBLite consensus disorder prediction 375 413 - -
Aip03g04508 444 PANTHER RING-FINGER PROTEIN 27 440 - -
Aip03g04508 444 SMART VWA_4 119 322 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04508 Aip-Chr3 129359454 129362853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04508 K16280 - gmx:100800161 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04508 03 129359454 129362853 Aip03g04508 03 129359454 129362853 ECH
Aip03g04508 03 129359454 129362853 Aip10g01152 10 16409266 16414233 PCT