Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04507 ATGGAAAGGAGAAGATGCTCCACCTTTTTAGTGTTGTTATTGACACTCCAAGTGGTGAAGGCTCTGACGGAGGAGGTTCCACTAAGCACGAATTCACGGTGGATAGTAAACCAACAAGGGAAGAGGGTGAAGCTTGCGTGCGTCAATTGGGTGTCCCATCTAGAACCCGTGGTGGCGGAGGGGCTCAGCAAGAAGCCAGTGGATGTGATCTCGAAGGGTATAAAGTCCATGGGCTTCAACTGTGTGAGGCTCACTTGGCCCATTCTGTTGGTCACCAATGACTCCCTCGCTTCTCTAACCGTTAGACAATCATTTCAGAGCCTTGGCCTAACTGATTCCGTTGCTGGCATCCAAGCCAATAACCCCTCCATCATCGATCTCAATCTCATCCAAGCTTTTCAGGCAGTGGTGAAAAGTCTCGGGGACAACGATGTGATGGTGATCTTGGACAACCACATAACCGAACCAGGTTGGTGCTGCAATAACAACGATGGCAATGGCTTCTTCGGCGATAAATATTTCAACCCAGACCTCTGGATCCAAGGCCTCACCAAGATGGCCACTATTTTCAACGGAGTCACCAACGTTGTAGGCATGAGCTTAAGAAACGAGCTTCGTGGCCCTAGACAGAATGTCAACGATTGGTACAAGTATATGGTGAAAGGAGCGGAAGCGGTTCATGCAGCGAACCCAAATGTGATTGTAATCTTGTCTGGCTTAAGTTTTGACAAGGACTTATCGTTCGTTAGGAATAGAGCAGTGCAAGTGTCTTTTAAGGGGAAACTAGTTTTTGAGGCGCACTGGTATGCCTTCACGGATGGTCAAGCTTGGGTTCAAGGGAACCCCAACCAAGTGTGTGGACAAGTGTCCGCAAACGTCATCACCAATTCTGCTTTCTTGCTGGACCAAGGATGGCCCTTGTTTTTCAGCGAGTTTGGGTTGGACATGAGAGGTACCAATCTTAATGATAATAGGTACATCACCTGCTTCATGGCTCTTGCGGCTGACCTGGACTTCGATTGGGCCTATTGGACTCTTGTTGGCAGTTATTATTTTAGACAAGGCGTTGCTGGAATGGAAGAGTTTTATGGGCTTCTTACTTGGGACTGGGCCAATGTTAGAAATACTACGTTCTTGCAAAGGATCTCTTCCCTACAACTTCCCTTCCGAGGACCAGGCATAACACAAGGTAATCCATACAAAGTGATTTACCATCCTTTGACGGGGCTTTGTGTGACAAGGAAGTCAATACAAGACCCATTGAGGTTGGGCCCTTGTTCTAACTCTGATGGTTGGAAGTATACGCCTCAAAAGATACTAAACGTAATGGGAACTTACTATTGCTTACAAGCGGATCAAGAAGGAAATCCTGCAAAACTTAGCATAATTTGCTCTGCTTCTAACTCTAAATGGGAAATGATCTCAGACTCAAAGTTGCACCTCTCCTCTAACCTCACCGATGGTTCTAAGGTTTGTTTGGATATAGATTCCAACAATAATATTGTGACCAATGCTTGCAAATGCTTGAGCACAGATCATACTTGTGACCCTGGAAGCCAATGGTTCAAACTTGTTGACACTGGAAGCTCAGCAACCTCATCCATGTTGGATTTACCATATGCTTTATGGGATTCATTATTCGAGTTAACAAATCTGCTTTCAAAGGCATATTTGTAA 1677 0.4568 MERRRCSTFLVLLLTLQVVKALTEEVPLSTNSRWIVNQQGKRVKLACVNWVSHLEPVVAEGLSKKPVDVISKGIKSMGFNCVRLTWPILLVTNDSLASLTVRQSFQSLGLTDSVAGIQANNPSIIDLNLIQAFQAVVKSLGDNDVMVILDNHITEPGWCCNNNDGNGFFGDKYFNPDLWIQGLTKMATIFNGVTNVVGMSLRNELRGPRQNVNDWYKYMVKGAEAVHAANPNVIVILSGLSFDKDLSFVRNRAVQVSFKGKLVFEAHWYAFTDGQAWVQGNPNQVCGQVSANVITNSAFLLDQGWPLFFSEFGLDMRGTNLNDNRYITCFMALAADLDFDWAYWTLVGSYYFRQGVAGMEEFYGLLTWDWANVRNTTFLQRISSLQLPFRGPGITQGNPYKVIYHPLTGLCVTRKSIQDPLRLGPCSNSDGWKYTPQKILNVMGTYYCLQADQEGNPAKLSIICSASNSKWEMISDSKLHLSSNLTDGSKVCLDIDSNNNIVTNACKCLSTDHTCDPGSQWFKLVDTGSSATSSMLDLPYALWDSLFELTNLLSKAYL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04507 558 SUPERFAMILY Ricin B-like lectins 396 524 IPR035992 -
Aip03g04507 558 Pfam Cellulase (glycosyl hydrolase family 5) 68 346 IPR001547 GO:0004553|GO:0071704
Aip03g04507 558 SUPERFAMILY (Trans)glycosidases 27 377 IPR017853 -
Aip03g04507 558 Gene3D Glycosidases 25 386 - -
Aip03g04507 558 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 4 539 - -
Aip03g04507 558 CDD RICIN 400 506 IPR000772 -
Aip03g04507 558 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 4 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04507 Aip-Chr3 129355467 129358054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04507 27 536 Glycoside Hydrolase AT1G13130 59.728 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04507 - - gmx:100790415 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04507 03 129355467 129358054 Aip03g04507 03 129355467 129358054 ECH