Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04506 ATGGCAATGGTGCCCAGGAAGTTGCAATCCCACTTTTTTTCAGCATCAGATGACAGTACAATGACCAAACAAATTCGTGCCACTCATGCTCCTGTTGATGATGAACGCATTGATGTTAGGCCTCTTCTTAATGTGGTTCAACACATTTTCAACTCTGCTGCTTCTATCATCCCTGGCATTGTTCAGGGAAAGCCAGCGAAATTGGATGGCTTAATGGATAGCTTCCAACAATCTGAGTTAACTGACATGCTAGATATCACCTCCCACACAATTAACAAAGTTTCATGCGAGATATCTTGCAAGTGTTTGAGTGGTGGAGATGCACATGCCACAACCATGGGGATACTAAGCATGCTGTCAAGGTATTCATGGGAGGCCAAGGTGGTGATAGCATTGGCGGCATTCGCGACCAACTTTGGCAAGTTCTGGCTTCTGGCTCAGGTTCATGCCACCAACCCTCTTGCCAGGTCTGTTGCAATGTTGAAACACATCCATGAAACGCTGGAACAAGTGAATGAATTGGGACCCAAGTTTGAAGCAATCAGCCACCTTCTCAAGGCCATGTTGGATGTAACCAACTACATTATGCAGTTCCATGACCTTCCCTCTCAGTACATTGACCCTGAAGCACCAGAGACGCTAGCTGCCTCCAATCTTATTCCAAGTGCTGTCTATTGGACCATTCGGAGTATCATCGCCTGCGCAACACAGATTCTAGGCATCATTGGCCTCGGTCAAGGATTCATGTCATCAACAATAGAGACTTGGGAACTTTCCAGTTTGGCTCATAAGCTCAGTAACATAAACAGCCACCTTCTTAAGCAACTTGACCTCTGTCGTCAACATTTAGATGATAACAAACAACGAGAAGCATTTGAAACACTTCAGATCCTTTTTCAGACATCCCACCCTGACAACATGAAGATTCTCAAAGCCTTGATTTACAACAAGGATGATATGTTGCCATTGTTTGATGGCTCTACCAAACAACGGGTTAGCATTGAGGTGCTGCGGAAGAAAATTGTGTTACTCTACATAACAGACCTCCATCATATTTCTGATCAAGAAATCATGATCTTTGAACAAATGTATCAAGAATCACGCCAGGAATCGAGCAGGTTTGAGAGCCAATACGAATTAGTTTGGATCCCAATTGTGGATAAGGGAACCCCATGGACAGAAGAGAAACAAAACAAGTTTGTGAAGCTGCAATCTATGATGACTTGGTACTCACTCTACGACCCTTCCATGTTGGAGCCAGCAACCATCAGGTACATAAAAGAGGTGTGGCTTTTCAATAATGTCAAGCCAATAATTGTAGTTCTGGATCAGCAAGGAAAGGTTGTTAACCTGAATGCAATACACATGATGTGGATTTGGGGAAGCTTGGCTTATCCTTTCTCCAGTTCAAGGGAGGAAGCATTGTGGAAGCAAGAATCATGGCGGCTTGAACTGTTGGCAGATACAATACATCCATCTCTCTATGATTGGATAGCACAAGGCACATACATATGCTTGTACGGAGGGGACGACATAGAGTGGATTCGGAAGTTCACAAGGAAGGCACGATCACTGGCAGAAACTCTCAAGTTACCACTGGAGATGATCTATGTAGGGAGAAGCAACCCAGGAGAAAAGGTTCGAAAAATCAACACGGTCATCGAAGAAGAAAAGTTAAGCAACACACTCCCTGACCCTGGGCTCACCCTTATATGGTTCTTCTGGGTTAGGCTGGAGAGCATGTGGCACTCAAAACTGCAGCAGGAAAAAAAAGTGGAAAATGATGAGATAATGCAGGAGATAATGAGGATTCTAGGCTTTGACAGCAGTGAGCAAGGGTGGGTTGTGATGAGCAGAGGCACAGAGAATATGATGGCAAAGGGAAAGGGAGACACATTCCTGAATTGCCTCAATGACTATGATCAATGGAAGGACAAGGCAGAGGACAAGGGGGTTTTGCCTGCAATGGATGATTATATTCAAGGATTACAAACCCCACATCATTGTAATCGCTTGATACTGCCGGGAACCAATGGCAGAATCCCAGATAAGGTGGTTTGTGTCGAATGCGGCCGTCCCATGGAAAAGTTCTACATGTATCGCTGCTGCACAGACTGA 2118 0.4471 MAMVPRKLQSHFFSASDDSTMTKQIRATHAPVDDERIDVRPLLNVVQHIFNSAASIIPGIVQGKPAKLDGLMDSFQQSELTDMLDITSHTINKVSCEISCKCLSGGDAHATTMGILSMLSRYSWEAKVVIALAAFATNFGKFWLLAQVHATNPLARSVAMLKHIHETLEQVNELGPKFEAISHLLKAMLDVTNYIMQFHDLPSQYIDPEAPETLAASNLIPSAVYWTIRSIIACATQILGIIGLGQGFMSSTIETWELSSLAHKLSNINSHLLKQLDLCRQHLDDNKQREAFETLQILFQTSHPDNMKILKALIYNKDDMLPLFDGSTKQRVSIEVLRKKIVLLYITDLHHISDQEIMIFEQMYQESRQESSRFESQYELVWIPIVDKGTPWTEEKQNKFVKLQSMMTWYSLYDPSMLEPATIRYIKEVWLFNNVKPIIVVLDQQGKVVNLNAIHMMWIWGSLAYPFSSSREEALWKQESWRLELLADTIHPSLYDWIAQGTYICLYGGDDIEWIRKFTRKARSLAETLKLPLEMIYVGRSNPGEKVRKINTVIEEEKLSNTLPDPGLTLIWFFWVRLESMWHSKLQQEKKVENDEIMQEIMRILGFDSSEQGWVVMSRGTENMMAKGKGDTFLNCLNDYDQWKDKAEDKGVLPAMDDYIQGLQTPHHCNRLILPGTNGRIPDKVVCVECGRPMEKFYMYRCCTD 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04506 705 Pfam Sieve element occlusion C-terminus 470 704 IPR027944 -
Aip03g04506 705 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 1 704 - -
Aip03g04506 705 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 704 IPR039299 GO:0010088
Aip03g04506 705 Pfam Sieve element occlusion N-terminus 16 303 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04506 Aip-Chr3 129352032 129354886 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04506 - - gmx:100799626 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04506 03 129352032 129354886 Aip03g04506 03 129352032 129354886 ECH
Aip03g04506 03 129352032 129354886 Aip10g01141 10 16205047 16208477 PCT