Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04404 ATGTCCCTCCACAGCGAATCGACTGACCACTGGAGGGTGGCATCCCCGGCATTGAGGGGCGCCGAAAACGCCGTCCCCGGGTGCGCATACGGTGGAGCGGTTTCGAGCCAGAGACTGAGGGTGAACCCGATCAGAGACCACGTATCGGAATCGTACGATGAATTGGAGTTGGATTTCAGCCCTTCGATTTTCAGCTCTCTGGAGAAGCACCTTCCGATGAACATGCTCAATGCAACTCGCGGGGACAAGCTCAAGTACCTCAGAACCATTCTCCTCGACTATCTTCCCCCTGCCGCTCGCATTAGAGACCAAAAGTATAGAGAATACACACAGATGATACTATCAAATTATAAGCCTCTCAATAAAGAGTTGTACGCTATGAATCCTACAGCATTCTTTGTCCCAGCATTCCTGAAAGCAATTAGTGATAATAATGAAGACAGTTTTAGAAGTATAGTTTCTGAGCCCTTCCCTGGCATTTTTACATTTGAAATGCTTCAGCCACACTTTTGTGAATTGCTGTTATCTGAGGTCGAAAGCTTTGAGAGGTGGGCTTTCAAAACAAAATTTCAGATTATACGTCCCAATACAATGAATAAGTATGGTACTGTACTCGATGACTTTGGCCTTCAAACTATGCTTGCCAAGCTTAGAGAAAATTTCATTAGTCCTTTGTCTAAAGTGTTTTTTGCAGAACTTGGTGGATCAACCCTGGATGCTCATCACGGGTTTATTGTGGAATATGGCAAAGATAGAGATATTGACTTAGGTTTCCATGTGGATGATGCAGACATAACCTTGAATGTTTGCCTGGGCAAGGAATTTTGTGGAGGGGAATTGTTTTTTCGGGGCATGCGTTGTGATAAACATATAAATACAGAAAGTATTGCAGAGGAGATCTTTGATTATTCGCATGTCCCTGGACAAGCTGTCCTTCATCATGGTCGTCATCGCCATGGTGCTAGAGCCACTACATGGGGTCATCGGGTTAACCTAGTTCTTTGGTGCCGAAGTTCTGCTTTTAGAGAGCTGCAAAGGTATAAATCAGATTTCTCTAGCTGGTGTAATGTGTGCACTCGTCAGAAGAAAGAACGGCAGCGCAAAACAATAGATATTACCAGCTTGGATTTGTTCAAATGGAAAGGCGAAGCAACTGCATGA 1161 0.4453 MSLHSESTDHWRVASPALRGAENAVPGCAYGGAVSSQRLRVNPIRDHVSESYDELELDFSPSIFSSLEKHLPMNMLNATRGDKLKYLRTILLDYLPPAARIRDQKYREYTQMILSNYKPLNKELYAMNPTAFFVPAFLKAISDNNEDSFRSIVSEPFPGIFTFEMLQPHFCELLLSEVESFERWAFKTKFQIIRPNTMNKYGTVLDDFGLQTMLAKLRENFISPLSKVFFAELGGSTLDAHHGFIVEYGKDRDIDLGFHVDDADITLNVCLGKEFCGGELFFRGMRCDKHINTESIAEEIFDYSHVPGQAVLHHGRHRHGARATTWGHRVNLVLWCRSSAFRELQRYKSDFSSWCNVCTRQKKERQRKTIDITSLDLFKWKGEATA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04404 386 SMART p4hc 158 337 IPR006620 GO:0005506|GO:0016705|GO:0031418
Aip03g04404 386 Gene3D q2cbj1_9rhob like domain 160 338 - -
Aip03g04404 386 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 239 338 IPR005123 -
Aip03g04404 386 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 34 384 - -
Aip03g04404 386 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 34 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04404 Aip-Chr3 128368303 128372041 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04404 - - twl:120016595 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04404 03 128368303 128372041 Aip05g03014 05 132412974 132417381 PCT