Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04352 ATGCTCCCTCTCCTACAACTTCCATCTCAACTGCCGCTGCTCCCCTCGTCGGCAGCAAATCTACCGGAGAACCAACCAGCAGAGAAACTGAAGGAACACCTCAAGCTCTCACTTGTGCCGCTTGTGGCTGCAACAAAAGCTTCCATAAGCTTTAAGTTTGAACGGAGGCTGTCACCAACCATGGCCCCTATGGCCAAAGCTTACAAGGACAACAATAGACGCGACCCCTTACTTTACTCTCTCCCTAATCCCAATCTCCACTTCGCAAACATCATCACTTGGACTCGCAAAGTCACACTCATCCTCTCTTTCTCTCTCTTTAACCTTGTGACTTTCTCGCTCTACAATTCCAAAACCCTAGCCCTATCTTCACCTCCTCCATTTCTTTTCATCGCCCTAATAATGGGTTCCGAAGGATCAAGTGTTGTTGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATTGGAGATGGAACTGTAAGCTATGGAATGGATGATGCTGATGATATCTACATGCAATCATGGACTGGGACAATTATAGGTCCCCCTGGTGTAAGATGTTTGTTATTATTAAAATTATGTTATATGTTATATATGGTTTGTTGTAATTAA 630 0.4413 MLPLLQLPSQLPLLPSSAANLPENQPAEKLKEHLKLSLVPLVAATKASISFKFERRLSPTMAPMAKAYKDNNRRDPLLYSLPNPNLHFANIITWTRKVTLILSFSLFNLVTFSLYNSKTLALSSPPPFLFIALIMGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGVRCLLLLKLCYMLYMVCCN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04352 209 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 142 190 - -
Aip03g04352 209 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 142 190 - -
Aip03g04352 209 Gene3D Ubiquitin Conjugating Enzyme 132 192 IPR016135 -
Aip03g04352 209 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 145 209 IPR000608 -
Aip03g04352 209 SUPERFAMILY UBC-like 143 190 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04352 Aip-Chr3 127951329 127955762 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04352 K10704 - mdm:103430616 114.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04352 03 127951329 127955762 Aip03g04352 03 127951329 127955762 ECH