Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04345 ATGGATCAAGAGTCTTCTCCTCACGAGGCCATGTTTCTGGTGTTAGGTTACCTTCCAGTCTACGAGCTTTTATTGATGTCTCAAGTTTGCAGGTCACTGAGAGATGCACTGAACAACGATGTGCTGCCATGGCTAAACATCCTTGTTCAAAGGCCTCTCAGTTCTCGACTCTCTGATCACACTCTCATCAACATCACCTCCAAGGCCAATGGTGGCCTCAAAACACTCTCTCTTATCAACTGCATCCACATCACGAACCACGGCCTTCAAACCCTCGTTCGTCAAAACCCTCACATAACAAAGCTGCACATACCAGGATGCAGCAGCATAACCCCTGAAGGAGTCGTAGCAGCCGTGACAACACTCTGCCATGGAAGCAATTGCTTAAGAACCTTGAGAATTAACGGCATCTATAACCTAAACAGGGAGCATCTACGCACGCTGGCTTCTTGCCTTAACAACAACCTCCAATTAGAGCAGCAGCCTCTCTTCTATCACGAACGCCACAGAGAAAGGGAGAGGATTATTGATTTGGAGGCATGTCCCAAGTGCTATGAGGCGAGGGAGGTTTATGACTGCCCGAAAAGAGAGTGCGAGTGTAGAGCATGCAGTTTTTGTATTCCAAGATGTGAAAACTGTGGTGGCTGCATTGCATCAGAACAAGTGGAAGAGGCTGCTTGTTCAGATATCTTGTGCCTTAATTGCTGGTTACATGAGCATCCCAAATGCAGTTTCTGTAACAAGCCATACTGTAGGCAACACACTTCATGGTGGCCCAATTCTTCTGACTCTACATTCGTTTGTAGAGTTTGCCAAGAAAATTCAAGTGGATACACCTACATGGATGACTTTATGTAA 858 0.4627 MDQESSPHEAMFLVLGYLPVYELLLMSQVCRSLRDALNNDVLPWLNILVQRPLSSRLSDHTLINITSKANGGLKTLSLINCIHITNHGLQTLVRQNPHITKLHIPGCSSITPEGVVAAVTTLCHGSNCLRTLRINGIYNLNREHLRTLASCLNNNLQLEQQPLFYHERHRERERIIDLEACPKCYEAREVYDCPKRECECRACSFCIPRCENCGGCIASEQVEEAACSDILCLNCWLHEHPKCSFCNKPYCRQHTSWWPNSSDSTFVCRVCQENSSGYTYMDDFM 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04345 285 SMART LRR_CC_2 96 121 IPR006553 -
Aip03g04345 285 SMART LRR_CC_2 70 95 IPR006553 -
Aip03g04345 285 ProSiteProfiles F-box domain profile. 1 47 IPR001810 GO:0005515
Aip03g04345 285 SUPERFAMILY RNI-like 60 159 - -
Aip03g04345 285 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 200 211 IPR017900 -
Aip03g04345 285 PANTHER F-BOX PROTEIN SKIP28 4 277 - -
Aip03g04345 285 SUPERFAMILY F-box domain 7 57 IPR036047 GO:0005515
Aip03g04345 285 Pfam F-box domain 7 42 IPR001810 GO:0005515
Aip03g04345 285 Gene3D Ribonuclease Inhibitor 52 162 IPR032675 -
Aip03g04345 285 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 4 277 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04345 - - lang:109340729 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04345 03 127896404 127897540 Aip03g04345 03 127896404 127897540 ECH