Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04287 ATGAAGAAGTGGTATGGCAGGATTGTGATGGCATCATTGTTCATGTTGTTCATGGTTCTGCTCCTTAGATACAGTTTCATGAAATACCCTAACGGGGCAACATATCTCACTCTAGTTCCTGTTTCTTTGAACAACAAAACTGATCCTATAAAGTGGATTGATCCTATGGTTTCACCTGTTCAGAGTCCAAACAATGATTCTCAAGTTGTTCCTTCAGACATTGTAGTATCTAGCCTGTTTTCCATGAACAATTTCACCAAACAAGAGCAACAAACTATGCAGACATGGAACAAGTTAAAACACTTGCTTGATCATACTAAGGGATTGCCTAATGCTGTGGAAGCTGTTAAAGAAGCTAAAGGCGCATGGAATAGTCTTGTTTGCTTAATAGAAGAACAAAGGGAAGGTTATAGGAATGAGAGTTTAAGATTGAAGGAGAAACAATGTCCCTATTTTCTTAACAATATGAATTCCACAGAACTTGGTAGTGGTAGTTACAAGCTGAGGTTTCCATGTGGCCTCACACAAGGTTCTTCCATATCTGTTATTGGTGTTCCCAAAGGGCTACTAGGCGATTTTCGGATTGACTTGACTGGAGAACCCCTTGCCGGAGAACCTGATCCTCCAATTGTTTTGCATTACAATGTTAGGCTCCATGGCGATAAGATCACCCAAGATCCTGTGATTGTTCAGAATACTTGGACAAAAGATCAAGATTGGGGTGCAGAGGAACGTTGCCCTTCTCTTGCTCCTGAAAATGCTAAGAAAGTTGATGAGTTGGAGCAGTGCAATAAGATTGTGGGAAAGAACATGGAGGGAAATGGCATGCAGTCCCACACTTCTAGGAAACTTTCAGCACCAAAAGAGGAACAATTGAAAAACAGAAAATATTTTCCTTTTAAGCAAGGCGATCCATTTGTTGCAACTATTAGAGTTGGATCAGAGGGAATCCAAATGACTGTTGATGGAAAACACATAACTTCATTCGCTTTTCGCCAAACTTTGGAGGCATGGCTTGTGAGTGAGATGAGAATTTCAGGAGATGTTGAGTTAATTTCTGTCCTTGCCAGTGGTCTTCCTACATCAGAGGATTCAGAGCATATTGCTGATATAGAATCACTGAAATCTACTCCTATATCTGCCAATACCCCATTGGATCTCTTCATTGGTGTTTTCTCTACAGCTAACAATTTCGAGCGTAGGATGGCTGTTAGAAGAACATGGATGCAGTACAATGCAATTCGATCCAATCAAACTGCGGCCGTGCGCTTCTTCGTTGGTTTGCATAAGAACCAAATTGTAAATGAAGAATTGTGGAAAGAATCACAAACCTATGGTGACATTCAGCTAATGCCATTTGTTGACTACTATAGCATCATCTCATGGAAAACTTTAGCAATCTGCATTTTTGGGACAGAGATTGTTTCAGCAAGGTTTGTGATGAAGACAGACGATGATTCATTCGTTCGTGTGGATCAAGTTCTGGACACTTTGTATCGGATCAATGTGGATCATGGCTTGCTGTACGGACTCATCAATTCAGATTCTCGACCTCATCGAAGTGCTGATAGTAAATGGTACATCAGCCGGGAGGTAGAGACATACAAAACTGCTCTTCATTAA 1623 0.4079 MKKWYGRIVMASLFMLFMVLLLRYSFMKYPNGATYLTLVPVSLNNKTDPIKWIDPMVSPVQSPNNDSQVVPSDIVVSSLFSMNNFTKQEQQTMQTWNKLKHLLDHTKGLPNAVEAVKEAKGAWNSLVCLIEEQREGYRNESLRLKEKQCPYFLNNMNSTELGSGSYKLRFPCGLTQGSSISVIGVPKGLLGDFRIDLTGEPLAGEPDPPIVLHYNVRLHGDKITQDPVIVQNTWTKDQDWGAEERCPSLAPENAKKVDELEQCNKIVGKNMEGNGMQSHTSRKLSAPKEEQLKNRKYFPFKQGDPFVATIRVGSEGIQMTVDGKHITSFAFRQTLEAWLVSEMRISGDVELISVLASGLPTSEDSEHIADIESLKSTPISANTPLDLFIGVFSTANNFERRMAVRRTWMQYNAIRSNQTAAVRFFVGLHKNQIVNEELWKESQTYGDIQLMPFVDYYSIISWKTLAICIFGTEIVSARFVMKTDDDSFVRVDQVLDTLYRINVDHGLLYGLINSDSRPHRSADSKWYISREVETYKTALH 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04287 540 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 65 531 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip03g04287 540 Gene3D - 377 536 - -
Aip03g04287 540 PANTHER - 65 531 - -
Aip03g04287 540 Pfam Galactoside-binding lectin 166 355 IPR001079 GO:0030246
Aip03g04287 540 SMART Gal_bind_lectin_2 170 356 IPR001079 GO:0030246
Aip03g04287 540 SMART galectin_3 164 357 IPR001079 GO:0030246
Aip03g04287 540 CDD GLECT 166 354 IPR001079 GO:0030246
Aip03g04287 540 SUPERFAMILY Concanavalin A-like lectins/glucanases 166 357 IPR013320 -
Aip03g04287 540 Pfam Galactosyltransferase 399 531 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip03g04287 540 Gene3D - 162 355 - -
Aip03g04287 540 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 166 357 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04287 Aip-Chr3 127221293 127225135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04287 1 531 Glycosyltransferase AT1G26810 58.041 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04287 K14413 - gmx:100780913 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04287 03 127221293 127225135 Aip03g04287 03 127221293 127225135 ECH