Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04286 ATGGAATCTAAGGGGTCGATATTGATGTTGTTGAAGCTTGTGGTGCTTCAGTACTTGGCAGTTTGGCCAGGATCTTACTGTGACACAAAGAGCAGTTGCTGCTACCCAACAAGCGGGAAACCCGCTGCAGATTTCGGCATTCATGGCCTCTGGCCTAACAACAATGATGGGTCTTACCCTTCTAACTGTGACTCTAACAATGCTTTTCAACCATCTCTGGTATCAGATCTGAGAAGCAGCTTACAAAGAAACTGGGCCACGCTGGCATGTCCAAGTGGGAATGGGATAGAATTCTGGAGCCATGAATGGGAGAAGCATGGAACTTGCTCAGAGTCAATATTGGAGCAACATGACTACTTCCAAACAGCTCTGAATCTGAAACAGAGAGCCAATATCCTGAGAGTTCTTACAAATGCAGGAATAGCGCCAAATGGGAATGCATACAGCTTGAGCAGCATAAAGGGAGCCATCAAGCAAGGAGTAGGGTACACTCCATACATAGAGTGCAACGTGGACTCCTCAGGGAACAGCCAGCTGTACCAAGTGTACCTGTGTGTCGATGCATCTGCTTCACGCTTCATTGAATGCCCTGTCTTCCCCAACGCCAAATGTGCTTCCCAGATTCAGTTCCCTCCATTCTAG 642 0.4766 MESKGSILMLLKLVVLQYLAVWPGSYCDTKSSCCYPTSGKPAADFGIHGLWPNNNDGSYPSNCDSNNAFQPSLVSDLRSSLQRNWATLACPSGNGIEFWSHEWEKHGTCSESILEQHDYFQTALNLKQRANILRVLTNAGIAPNGNAYSLSSIKGAIKQGVGYTPYIECNVDSSGNSQLYQVYLCVDASASRFIECPVFPNAKCASQIQFPPF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04286 213 ProSitePatterns Ribonuclease T2 family histidine active site 1. 45 52 IPR018188 GO:0003723|GO:0033897
Aip03g04286 213 Pfam Ribonuclease T2 family 17 196 IPR001568 GO:0003723|GO:0033897
Aip03g04286 213 CDD RNase_T2_euk 15 210 IPR033697 -
Aip03g04286 213 ProSitePatterns Ribonuclease T2 family histidine active site 2. 98 109 IPR033130 -
Aip03g04286 213 Gene3D - 12 213 IPR036430 GO:0003723|GO:0033897
Aip03g04286 213 SUPERFAMILY Ribonuclease Rh-like 16 213 IPR036430 GO:0003723|GO:0033897
Aip03g04286 213 PANTHER RIBONUCLEASE T2 17 213 IPR001568 GO:0003723|GO:0033897
Aip03g04286 213 PANTHER BNAA02G26660D PROTEIN 17 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04286 Aip-Chr3 127215339 127216114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04286 K01166 - gmx:100305644 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04286 03 127215339 127216114 Aip03g04286 03 127215339 127216114 ECH