Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04268 ATGGCTCTTTATAGAAACAATGGTGAATTGCTCACCGAGAGAAGGGGCATCATTGATGCGGTTGTCAATTCTCTTGGTAAAAGTGACCATGGCTCGCGAATCTTGCGTCGTGGTAGAAGGCTTGGTCGGATTACCAAGCACAAACTTTCGCGTTGGCTTCTCCTTCTTGCTGCACTCTTTTCAGTTTATTTCACAGTTTGTGGCCTGAAAATGTTTATTCACGGGCTCAACCTACACAGTAAACATGAAGAGCTCAACCTACACAGTATACACAAAGAGCTCAACCTTCAAGAAACTGTTTCATTATCTGAATTTGGAAAACTACCACCTAAAAGCAAGCGCAGGAAGCATTTTCCTTGTGAAGTTGAATTTCTGAAGTCAGTAGATGGCCTTGCTGAACCCAAGAATTACATGAATTTCACTTGGTTTTCTCTAGATTATGTTAAACAAGAAGGAAAAACATCCGATAGTGGTTTGTTTGAACCTCGATTTGGAGGACATCAGACTCTTGAGGAGAGAGAAAAGTCATTTTATGCCAAAAACCAAATGGTTCATTGTGGTTTTGTCAAGGGATCACCAGGGTATTCAAGCACTGGATTTGATTTAGATGAAAAAGATAAGGCATACATGTCAAAGTGTAAGATTGCAGTTTCTTCTTGCATTTTTGGAAGCTCCGATTTTCTCCGGAGGCCTACAAGTAGACTGATTAGTCAATATTCAAAGAACAATGTTTGTTTTGTGATGTTCTTGGATGAACAAACACTATCCAAACTGTCATCAGAAGGGAACAGTCCCGATGAAAGAGGGCATATTGGCCTATGGAAAAAGTATTCAATTTGGCTTGACAGCAAGATGAGACTGAATGCTGATCCTATGTTGATCATTGAATATTTTTTGTGGCGAAGGAATGCTGAATTTGCCATTTCAAATCATTATGACCGCCACTGTGTCTGGGATGAGGTGCTCCAAAACAAACGCTTAAACAAGTACAACCACACGGCAATTGACGAACAGTTTAACTTTTACCAATCTGATGGCCTAACCAAGTTTGATCCTTCAAACCCAAATAATCCTCTTCCAAGTTATGTTCCTGAGGGTTCCTTGATAATAAGGGCACATACACCAATGTCAAATTTATTTTCATGCCTTTGGTTCAATGAAGTTGATCGATTTACTTCTCGAGATCAACTAAGCTTTGCTTATACTTATTTGAAATTGAGGAGAATGAATCCAGAGAGACCATTTCAGTTGCATATGTTCAAGGTGCCTAATTGA 1275 0.3953 MALYRNNGELLTERRGIIDAVVNSLGKSDHGSRILRRGRRLGRITKHKLSRWLLLLAALFSVYFTVCGLKMFIHGLNLHSKHEELNLHSIHKELNLQETVSLSEFGKLPPKSKRRKHFPCEVEFLKSVDGLAEPKNYMNFTWFSLDYVKQEGKTSDSGLFEPRFGGHQTLEEREKSFYAKNQMVHCGFVKGSPGYSSTGFDLDEKDKAYMSKCKIAVSSCIFGSSDFLRRPTSRLISQYSKNNVCFVMFLDEQTLSKLSSEGNSPDERGHIGLWKKYSIWLDSKMRLNADPMLIIEYFLWRRNAEFAISNHYDRHCVWDEVLQNKRLNKYNHTAIDEQFNFYQSDGLTKFDPSNPNNPLPSYVPEGSLIIRAHTPMSNLFSCLWFNEVDRFTSRDQLSFAYTYLKLRRMNPERPFQLHMFKVPN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04268 424 PANTHER ALKALINE CERAMIDASE-RELATED 276 421 IPR006852 -
Aip03g04268 424 PANTHER BNAA02G26630D PROTEIN 12 275 - -
Aip03g04268 424 PANTHER BNAA02G26630D PROTEIN 276 421 - -
Aip03g04268 424 PANTHER ALKALINE CERAMIDASE-RELATED 12 275 IPR006852 -
Aip03g04268 424 Pfam Protein of unknown function (DUF616) 276 422 IPR006852 -
Aip03g04268 424 Pfam Protein of unknown function (DUF616) 145 275 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04268 Aip-Chr3 126984692 126987697 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04268 - - gmx:100807624 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04268 03 126984692 126987697 Aip03g04268 03 126984692 126987697 ECH