Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04267 ATGGCTCTTTATAGAAACAATGGTGAGTTGCTCACCGAGAGAAGGGGCATCATTGATGCGGTTGTCAATTCTCTTGGTAAAAGTGACCATGGCTCACGAATCTTGCGTCGTGGTAGAAGGCTTGGTCGGATTACCAAACACAGACTTTCGCGTTGGCTTCTCCTTCTTACTGCACTCTTTTCAGTTTATTTCACAGTTTGTGGCCTGAAAATGTTTATTCACGCTAAAATGGAATCTAGGTTCCCAGCGACTCACAGGATACGGGAAGGGATCAACCTACACAGTAAACATGAAGAGCTTAACCTACACAGTATACACAAAGAGCTCAACCTTCAAGAAACTGTTTCATTATCTGAATTTGGAAAACCACCACCTAAAAGCAAGCGCAGGAAGCATTTTCCTTGCGAAGTTGAATTTCTGAAGTCAGTAGATGGCCTTGCTGAACCCAAGAATTACATGAATTTCACTTGGTTTTCTCTAGATTATGTTAAACAAGAAGGAAAAACATCCGATAGTGGTTTGTTTGAACCTCGATTTGGAGGACATCAGACTCTTGAGGAGAGAGAAAAGTCATTTTATGCCAAAAACCAAATGGTTCATTGTGGTTTTGTCAAGGGATCACCAGGGTATTCAAGCACTGGATTTGATTTAGATGAAAAAGATAATGCATACATGTCAAAGTGTAAGATTGCAGTTTCTTCTTGCATTTTTGGAAGCTCCGATTTTCTTCGGAGGCCTACAAGTAGACTGATTAGTCAATATTCAAAGAACAATGTTTGTTTTGTGATGTTCTTGGATGAACAAACACTATCCAAACTTTCATCAGAAGGGAACAGTCCCGATGAAAGAGGGCATATTGGCCTATGGAAAGTAGTAGTTGTGAAAAACTTGCCATATGAAGACATGCGGAGGACTGGCAAGGTGCCAAAATTTTTAGCACACCGCCTCTTCCCAAATTCTAGGTATTCAATTTGGCTTGACAGCAAGATGAGACTCAATGCTGATCCTATGTTGATCATTGAATATTTTTTGTGGCGAAGGAATGCTGAATTTGCCATTTCAAATCATTATGATCGCCACTGTGTCTGGGATGAGGTACTCCAAAACAAACGCTTAAACAAGTACAACCACACGGCAATTGACGAACAGTTTAACTTTTACCAATCTGATGGCCTAACCAAGTTTGATCCTTCAAACCCAAATAATCCTCTTCCAAGTTATGTTCCTGAGGGTTCCTTGATAATAAGGGCACATACACCAATGTCAAATTTATTTTCATGCCTTTGGTTCAATGAAGTTGATCGATTTACTTCTCGAGATCAACTAAGCTTTGCTTATACTTATTTGAAATTGAGGAGAATGAATCCAGAGAGACCATTTCAGTTGCATATGTTCAAGAGGGAAGGGTTTTGGGTCGCAGGAAAGGTTCGATTTTTGGGGGGGAAGTGGGAGAAGATGAGTAACCAGAGGAAGAGAAATTTTCAGATAGAAGCTTTCAAGCATAGGGTTGTCATAGATCCGAAATATGCCGACAAGACATGGAAGATTCTCGAACATGCTATTCATGAGATTTACAATCACAACGCCAGTGGTCTCAGCTTTGAAGAGCTTTACAGAAATGCATACAATATGGTGCTTCACAAATTCGGTGAGAAGCTGTATTCAGGACTGGTTGCTACTATGACTGGACATCTAAAAGAAATAGCCAAATCTGTTGAAGCTGCTCAAGGAGGTTCCTTTCTGGAAGAACTGAACAGAAAATGGAATGATCATAATAAGGCATTGCAAATGATTAGAGACATACTTATGTACATGGACAGGACTTATATACCAAGCACCCAGAAGACCCCTGTTCATGAACTCGGCTTGAACCTTTGGAGAGAAATCGTTATTTATTCCAATCAGATCAGGAATCGGTTACTGAACACACTTCTGGAATTAGTACATAGTGAACGTACTGGGGATGTTATTGATAGAGGGATAATGAGAAATATAACAAAGATGCTTGTAGATTTGGGTCCTTCTGTTTATGTGCATGAATTTGAACTGCATTTTCTTCATGTTTCAGCTGAGTTCTACCGGGTAGAATCCCAGAAATTCATTGAGTGTTGCGATTGTGGTGATTATTTGAAGAAAGCCGAGAGGCGTCTGAACGAAGAAATTGATAGAGTGAGCCATTACTTGGATCCCAGGACTGAAAAGAAGATCACTAATGTGGTGGAGAAGGAGATGATTGAAAATCACATGCTTAGATTAATCCATATGGAGAATTCTGGATTGGTACACATGTTTTCTGATGATAAATATGATGATTTGGGTAGAATGTATAATTTGTTCCGTCGTGTTCCCGATGGTCTCTCAAAAATTCGAGAAGTCATGACTGAACACATCAAAGAAACCGGCAAGCAGCTTGTTAATGATCCTGAAAGGTTGAAGGATCCTGTAGAATTCGTGCAGAGGCTCTTAGATGAGAAGGACAAATATGACAAGATTATCAACTTTGCATTTAACAATGACAAATCTTTCCAGAATGCTTTGAATTCCTCCTTTGAATATTTCATTAACTTGAACCCTCGATCTCCAGAGTTTATTTCGCTGTTTGTTGATGATAAACTTCGTAAAGGTCTGAAAGGGGTTAGTGAGGATGATGTAGAGGTTACCCTTGACAAGGTGATGATGCTATTCCGTTACTTGCAAGAAAAGGATGTTTTTGAGAAGTATTACAAACAGCATCTGGCAAAGCGACTTCTGTCAGGAAAAACTGTTTCGGATGATGCAGAGAGAAGTCTCATAGTTAAGCTCAAGACGGAATGTGGTTACCAGTTTACATCCAAATTAGAGGGCATGTTTACAGACATGAAAACCTCCCAGGACACTATGCAGGGCTTCTATGCCAGCCACCCCGAACTTGTTGATGGTCCTACACTTACTGTACAGGTCCTGACAACTGGGTCGTGGCCAACTCAGTCCAGTGTTACATGCAACCTGCCAGCCGAAATGTCTGCCCTTTGTGAGAAGTTTCGATCATATTACCTCGGAACCCACACCGGCCGGAGATTGTCCTGGCAAACTAATATGGGCACTGCAGACTTAAAAGCAACCTTTGGGAAAGACTTAGCTACAAGGAGATTGAGCAAGCGACTGAGATTCCTGCTTCAGATCTTAAGAGATGCCTGCAATCATTGGCTTTAG 3192 0.4073 MALYRNNGELLTERRGIIDAVVNSLGKSDHGSRILRRGRRLGRITKHRLSRWLLLLTALFSVYFTVCGLKMFIHAKMESRFPATHRIREGINLHSKHEELNLHSIHKELNLQETVSLSEFGKPPPKSKRRKHFPCEVEFLKSVDGLAEPKNYMNFTWFSLDYVKQEGKTSDSGLFEPRFGGHQTLEEREKSFYAKNQMVHCGFVKGSPGYSSTGFDLDEKDNAYMSKCKIAVSSCIFGSSDFLRRPTSRLISQYSKNNVCFVMFLDEQTLSKLSSEGNSPDERGHIGLWKVVVVKNLPYEDMRRTGKVPKFLAHRLFPNSRYSIWLDSKMRLNADPMLIIEYFLWRRNAEFAISNHYDRHCVWDEVLQNKRLNKYNHTAIDEQFNFYQSDGLTKFDPSNPNNPLPSYVPEGSLIIRAHTPMSNLFSCLWFNEVDRFTSRDQLSFAYTYLKLRRMNPERPFQLHMFKREGFWVAGKVRFLGGKWEKMSNQRKRNFQIEAFKHRVVIDPKYADKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYSGLVATMTGHLKEIAKSVEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTYIPSTQKTPVHELGLNLWREIVIYSNQIRNRLLNTLLELVHSERTGDVIDRGIMRNITKMLVDLGPSVYVHEFELHFLHVSAEFYRVESQKFIECCDCGDYLKKAERRLNEEIDRVSHYLDPRTEKKITNVVEKEMIENHMLRLIHMENSGLVHMFSDDKYDDLGRMYNLFRRVPDGLSKIREVMTEHIKETGKQLVNDPERLKDPVEFVQRLLDEKDKYDKIINFAFNNDKSFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVSEDDVEVTLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYASHPELVDGPTLTVQVLTTGSWPTQSSVTCNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGTADLKATFGKDLATRRLSKRLRFLLQILRDACNHWL 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04267 1063 Pfam Protein of unknown function (DUF616) 160 468 IPR006852 -
Aip03g04267 1063 SUPERFAMILY Cullin homology domain 853 1039 IPR036317 -
Aip03g04267 1063 SMART cul_2 889 1035 IPR016158 -
Aip03g04267 1063 Gene3D Cullin Repeats 500 628 - -
Aip03g04267 1063 Gene3D Cullin Repeats 630 749 - -
Aip03g04267 1063 Gene3D Cullin Repeats 858 969 - -
Aip03g04267 1063 PANTHER CULLIN 488 1038 IPR045093 -
Aip03g04267 1063 Gene3D Cullin Repeats 750 857 - -
Aip03g04267 1063 Gene3D Ring Box Chain A; domain 5 974 1040 - -
Aip03g04267 1063 Pfam Cullin family 514 1037 IPR001373 GO:0006511|GO:0031625
Aip03g04267 1063 SUPERFAMILY Cullin repeat-like 507 857 IPR016159 -
Aip03g04267 1063 ProSiteProfiles Cullin family profile. 859 1054 IPR016158 -
Aip03g04267 1063 PANTHER CULLIN-3A-RELATED 488 1038 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04267 Aip-Chr3 126973103 126980448 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04267 K03869 - gmx:100795098 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04267 03 126973103 126980448 Aip03g04267 03 126973103 126980448 ECH