Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04257 ATGATGTCAATGATGAACCCAATCCCAGGAAGGTTAATAGCAAGAGATTGGGTTCTCGCCACCTCCGAGGATCACAGGAATGATTTTGTGCTGCTGAGTGGTCTCCAAATAGATGAAGATGCTCTAGCTCATTCTCCTGAGCTGTTAGCTGAACATGACAAGTATCAAGCCAGGGATTCATTGGAGTCCGGTTTCCATCAATCTGATAAGCAGCAGGAGAATCAATCCAAGCATTTTTCTGATTCTGGAGTTCAGCAATCTGACGAGATGCAGCTGCTTGCTGCAAATTTGTCGAATTCCAGTGACCAGCCATCTGATCAGCAGCAAGAGAATCATTCCGGTGATTCATCGGATTCTGGTTCCCTTCTGCCTCGAATGAATAGAGACAGCTCGATTGCCTGTCTCAGCCGCTGTTCGAGGTCCGATTATGGTTCTCTTGCATCACTGAACTCGAGCTTTCGCAACATTATCCGAAGTGGTGAGCTATACAAGTGGAGGAGACTGAATGGAATCATAGAACACTGGGTTTACTTTTCCTGTGCCCTCCTTGAATGGGAGGCCTATGATCCCATTCGCGAAAGGTGGATGCATTTGCCTAGGATGGCTTCTAACGAATGCTTCATGTGTTCAGACAAGGAGTCCTTGGCTGTTGGTACTGAACTACTTGTGTTTGGGAGGGAGCTGAGATCCCATGTCATTTACAGATACAGTCTTTTGACGAATTCATGGTCTTCGGGAATGCGGATGAATGCTCCAAGATGCTTGTTTGGATCTGCTAGCCTTGGAGAGATTGCAATTTTGGCCGGTGGGTGTGATTCCGAGGGACGTATTCTGGACTCTGCTGAACTGTATAATTCCGAGAATCAACAATGGGAAATGCTCCCACCCATGAAAAAGCCTAGGAAGATGTGCTCTGGAGTATTCATGGATGGAAAGTTCTATGTGATCGGTGGAATTGGTGGAAGCGAGTCTAAGCTTCTTACCTGTGGTGAGGAGTACAATCTACAGACTAGGACATGGACAGAAATTCCTAGCATGTCCCCAGGACGCAATGCTAGGGGGGCCGAGATGCCTGCAACAGCCGAGGCGCCACCTCTGGTTGCTGTTGTAAATAATGAATTATATGCTGCTGATTATGCTGACATGGAGGTTAAGAAGTACGATAAAGAGAGAAAAGTGTGGAATACCATTGGGAGACTTCCGGAGCGAGCAGTGTCAATGAATGGCTGGGGTCTTGCATTCAGGGCATGCGGAAATCGGCTAATCGTGATAGGTGGACCTCGGACACAAGGTGGGGGTTTTATTGAACTCAACTCGTGGGTGCCGAGCGAAGGACCTCCCCAATGGAACCTACTGGCCAGGAAACGGTGGGGGAAGCATGGGGAAGAGATTCTGATATTACTCTCAAGATTAACTGAAAAGCATCCCGGGAAGGAGCTCTTTCAGTGTTTCAATTTTTATGTTTCAAATTTCAATTACTATTTTGTTCCATTCCATTGA 1500 0.4693 MMSMMNPIPGRLIARDWVLATSEDHRNDFVLLSGLQIDEDALAHSPELLAEHDKYQARDSLESGFHQSDKQQENQSKHFSDSGVQQSDEMQLLAANLSNSSDQPSDQQQENHSGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNSSFRNIIRSGELYKWRRLNGIIEHWVYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSENQQWEMLPPMKKPRKMCSGVFMDGKFYVIGGIGGSESKLLTCGEEYNLQTRTWTEIPSMSPGRNARGAEMPATAEAPPLVAVVNNELYAADYADMEVKKYDKERKVWNTIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRTQGGGFIELNSWVPSEGPPQWNLLARKRWGKHGEEILILLSRLTEKHPGKELFQCFNFYVSNFNYYFVPFH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04257 499 MobiDBLite consensus disorder prediction 64 85 - -
Aip03g04257 499 Pfam Kelch motif 252 297 IPR006652 GO:0005515
Aip03g04257 499 Pfam Kelch motif 300 347 IPR006652 GO:0005515
Aip03g04257 499 MobiDBLite consensus disorder prediction 98 124 - -
Aip03g04257 499 SMART kelc_smart 220 263 IPR006652 GO:0005515
Aip03g04257 499 SMART kelc_smart 264 311 IPR006652 GO:0005515
Aip03g04257 499 SMART kelc_smart 312 360 IPR006652 GO:0005515
Aip03g04257 499 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 60 458 - -
Aip03g04257 499 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 60 458 - -
Aip03g04257 499 SUPERFAMILY Kelch motif 182 451 IPR015915 GO:0005515
Aip03g04257 499 Gene3D - 176 454 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04257 Aip-Chr3 126802076 126803876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04257 - - gmx:100791897 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04257 03 126802076 126803876 Aip03g04257 03 126802076 126803876 ECH