Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04224 ATGGGGCTAGCTCTCGGTTGTCTTCAAGTGGACCAGTCAACGGTAGCTATCAAGGAAGTTTTTGGGAAGTTCGATGATGTGCTTGAACCCGGTTGCCACTTTGTGCCTTGGTGTCTTGGCAATCAAGTAGCTGGTTACCTTTCTTTGCGTGTGCAGCAGCTTGATGTTCGTTGCGAAACCAAGACAAAGGACAATGTCTTTGTCACCGTTGTTGCTTCTATCCAATATCGAGCACTTGCAGAAGGTGCCGTAGATGCATTTTACAAGCTTAGCAATACCAGAGCACAGATTCAAGCCTATGTCTTTGATGTTATTAGGGCAAGTGTTCCAAAGATGGAACTAGACGCCTCTTTTGAACAGAAGAATGAAATTGCGAAAGCTGTAGAGGAAGAACTTGAAAAGGCAATGTGTGCTTATGGCTATGAGATAGTTCAGACTCTTATTGTGGATATCGAACCGGATGAGCATGTCAAGAGAGCCATGAACGAGATAAATGCTGCTGCGAGATTGAGGGTGGCTGCAAATGAGAAGGCCGAGGCGGAGAAGATTCTGCAGATTAAGAGAGCAGAAGGAGAAGCAGAGTCGAAGTATCTAGCAGGGCTTGGAATAGCCCGCCAACGCCAAGCCATAGTTGATGGCCTGAGGGACAGCGTGCTAGCCTTCTCAGAGAATGTCCCTGGGACAACATCAAAGGATGTCATGGACATGGTTCTGGTCACCCAATATTTTGATACATTGAAGGAAATCGGTGCATCCTCAAAATCCAATTCTGTTTTCGTTCCACATGGACCGGGAGCTGTTAAAGATATTTCTTCACAAATTAGAGAAGGTCTTCTTCAAGGAAATGTGGCTTAA 855 0.4561 MGLALGCLQVDQSTVAIKEVFGKFDDVLEPGCHFVPWCLGNQVAGYLSLRVQQLDVRCETKTKDNVFVTVVASIQYRALAEGAVDAFYKLSNTRAQIQAYVFDVIRASVPKMELDASFEQKNEIAKAVEEELEKAMCAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTTSKDVMDMVLVTQYFDTLKEIGASSKSNSVFVPHGPGAVKDISSQIREGLLQGNVA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04224 284 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
Aip03g04224 284 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 284 - -
Aip03g04224 284 Coils Coil 118 138 - -
Aip03g04224 284 Coils Coil 157 190 - -
Aip03g04224 284 CDD SPFH_like_u4 10 278 - -
Aip03g04224 284 SUPERFAMILY Band 7/SPFH domain 45 171 IPR036013 -
Aip03g04224 284 Gene3D Band 7 domain 41 167 IPR036013 -
Aip03g04224 284 PANTHER BAND 7 DOMAIN-CONTAINING PROTEIN-RELATED 1 284 - -
Aip03g04224 284 SMART PHB_4 5 165 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04224 Aip-Chr3 126465381 126468347 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04224 - - egr:104453980 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04224 03 126465381 126468347 Aip03g04224 03 126465381 126468347 ECH