Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04208 ATGGGAGCCAACTATTCAAATTTGGAATATGTTCAAAGAGCACCAAAGCCATTATCATCAGTAGCTACTTCTCGAATCCTCACCTTCCATTCCTCTGCTAAATGGAAGGCTCACTTTGATGCTTCCAAACAAACAAATAAGCTGATGGTGATTGACTTCACGGCAACATGGTGTGGACCTTGCAAATACATGGACCCAATTTTCAAAGATTTTTCTGCCAAATACACAGAGGTTGAGTTCATTAAACTTGATGTGGATGAGTTAATGGGAGTGGCCCAAGAATTCCAGGTGCAAGCAATGCCAACATTCGTATTAGTTAAGAAAGGAAAAATTGTTGATAAGGTGGTTGGTGCAAGAAAGGAGGAGTTGCAGAAGCTTATTGAGAAACACAGGAAATGA 399 0.4035 MGANYSNLEYVQRAPKPLSSVATSRILTFHSSAKWKAHFDASKQTNKLMVIDFTATWCGPCKYMDPIFKDFSAKYTEVEFIKLDVDELMGVAQEFQVQAMPTFVLVKKGKIVDKVVGARKEELQKLIEKHRK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04208 132 Pfam Thioredoxin 37 128 IPR013766 -
Aip03g04208 132 SUPERFAMILY Thioredoxin-like 24 130 IPR036249 -
Aip03g04208 132 PANTHER THIOREDOXIN 1 132 - -
Aip03g04208 132 PANTHER THIOREDOXIN 1 132 - -
Aip03g04208 132 Gene3D Glutaredoxin 7 132 - -
Aip03g04208 132 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Aip03g04208 132 PRINTS Thioredoxin family signature 49 57 - -
Aip03g04208 132 PRINTS Thioredoxin family signature 57 66 - -
Aip03g04208 132 PRINTS Thioredoxin family signature 96 107 - -
Aip03g04208 132 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Aip03g04208 132 CDD TRX_family 37 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04208 Aip-Chr3 126207376 126208361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04208 K03671 - gmx:100817994 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04208 03 126207376 126208361 Aip03g04208 03 126207376 126208361 ECH