Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04200 ATGGAGTATTTCAACAAAGCCAAATCCGTGAAGCTTCGGAGCCACCTCGGCAAGTACCTAATCGCAGACGAGGACGGCGAAGGCCTCTACCAGAGCAGAAAAAGCTCGGCGAAGAACGCAATATGGGAGGTGGAGTTAGTAGAAGGGAAGAGCCACAGCATTCGGCTCAAGAGCTGTCACGGTCTGTACCTGAAGGCAACGGACACAGCGTTCCTTCTAGGAATGACCGGAAACCGGGCGGTGCAGTCGGAGATGGACGCAGCAGGTTCGAGTTGGAAGTACGAGTGGGAGCCACGAAGGGAAGGGTTGAGTAACCACGTGAAGCTGAGGAGTTGGTGTGGGACCTACCTTAGGGGAAACGGTGGCACTCCGCCTTGGAGGAATTCAGTTACGCACGACGATCCTCATAGTTCCACCACTCACTCTTGGATCTTGTGGACTGTGGAGGTTGTTGACAACATTATAGTTGGATCTTTTTCCAAAGAGAGATATGATGATGATGCGGTTGTTTCTGTGGCGGCGCTTTCTGATTCTTATGTAAGATCTCCGTCGTCGTTGCCGCTGTGTGAGGACCCCGCGGAGTTGCAGCTTACGGTGGTGCGTTTCCGCAGCCACCACGACAAGTACCTCACCGCCGACGACGATGAAGAATCCGTCGTCCAAGACCGCAACGGCGCCACCAAGAGCGCCAAGTGGCTCGTCGAAATAGTTCCCGAATACGACAACATCGTACGCCTCAAAAGCTGCTACAACAAGTACCTCACGGCATCAAACCAGCCCTTCCTCCTCGGCGTCACCGGCCGGAAGGTCCTCCAAACCCACCCCTCAAGACTTGACTCCTCCGTCGAATGGGAACCCATCAGAGACGGCGCCCAGGTCAAGCTCAAGACCCGTTACGGCAACTTCTTGCGGGCCAACGGTGGCTTGCCGCCGTGGAGGAACTCCGTTACACATGATATTCCGCATCGGACTTCCACTCAGGATTGGGTCTTGTGGGATGTTGATGTGTTGGAGATTCATGTTGATTATGTTCCTCCGCCTCCTCCTCCTACTCACTCTGATTCCCTCAATTTTGAATCGTCTACTCCTTCTGCTGTTGATGCCAAATCTGCTCAATTTTCTAGGCAGGAGTCGTCGGATTCATATGTGGGCTCGCCGCCGAAGATGGAGGGGAGAACTATATACTACCATGTTGCCGAGGATGATGGGGAAGTGGACGATGAGAATGTGCAGGGGTATTCTCTGATCTTCAAAGGGAACGGGGTGGAAGAATTGACAAAGAAGTTCGAGGAGGAGACAGGGTTAGAGGGAGTTATTGTGTGCAGTCGGAGTCCTTTGAATGGGAAGCTTTATCCTCTTCGATTGCAGCTTCCTCCAAACAATGTGATGATGCAGGTTGTTTTGGTTCTTCAATCGTCAAAAGTTGCAAAAGACTTTGAGGCACAAGGTTTACTTTGA 1458 0.5233 MEYFNKAKSVKLRSHLGKYLIADEDGEGLYQSRKSSAKNAIWEVELVEGKSHSIRLKSCHGLYLKATDTAFLLGMTGNRAVQSEMDAAGSSWKYEWEPRREGLSNHVKLRSWCGTYLRGNGGTPPWRNSVTHDDPHSSTTHSWILWTVEVVDNIIVGSFSKERYDDDAVVSVAALSDSYVRSPSSLPLCEDPAELQLTVVRFRSHHDKYLTADDDEESVVQDRNGATKSAKWLVEIVPEYDNIVRLKSCYNKYLTASNQPFLLGVTGRKVLQTHPSRLDSSVEWEPIRDGAQVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRTSTQDWVLWDVDVLEIHVDYVPPPPPPTHSDSLNFESSTPSAVDAKSAQFSRQESSDSYVGSPPKMEGRTIYYHVAEDDGEVDDENVQGYSLIFKGNGVEELTKKFEEETGLEGVIVCSRSPLNGKLYPLRLQLPPNNVMMQVVLVLQSSKVAKDFEAQGLL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04200 485 Gene3D - 5 151 - -
Aip03g04200 485 Gene3D - 199 318 - -
Aip03g04200 485 PANTHER ACTIN CROSS-LINKING PROTEIN 1 152 - -
Aip03g04200 485 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 152 - -
Aip03g04200 485 MobiDBLite consensus disorder prediction 354 383 - -
Aip03g04200 485 SUPERFAMILY Actin-crosslinking proteins 199 336 IPR008999 -
Aip03g04200 485 Pfam Domain of unknown function (DUF569) 198 332 IPR007679 -
Aip03g04200 485 Pfam Domain of unknown function (DUF569) 1 146 IPR007679 -
Aip03g04200 485 PANTHER ACTIN CROSS-LINKING PROTEIN 197 482 - -
Aip03g04200 485 MobiDBLite consensus disorder prediction 345 386 - -
Aip03g04200 485 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 197 482 - -
Aip03g04200 485 SUPERFAMILY Actin-crosslinking proteins 5 150 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04200 Aip-Chr3 126129045 126133425 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04200 - - gmx:100785006 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04200 03 126129045 126133425 Aip03g04200 03 126129045 126133425 ECH