Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04185 ATGTCTGATACTTCCAGGGGCCGGGTTACCATTACTCTTGGGCGTAGCGGTCAGGTTGTGAAGAGGGATGTATCAGCAACAGATGCTTCTTTCTCAGGTTCATATGCTTCTGCTGGGACGAAGAGATCTGCAAGAGACAGGCTCGGAAATAATGCTGACAGTTCCTCGTGGTATGGGAATGAACTCAGCAGCAATAAAAGACATCGAGGCTATATAGGCATGTCAAATGGGCTACATGATAGGCGAATTGGCAAAGATGATCTTCGATTAAAGCTCATGCGAAAAAGTGCATCTAGACAGTCTAAAAGGAACATAGACCTCCGTGAAAAACTGTTGAAGGCTCACCCTCTGTCAACACGTGTTAATTCCAGCCGGCTCATGCCTGAGCCAAGTGAGTCAAGCATGCCCAGGCAAACGCATTTGGCTAGAAGTTCTAATGATTTAACACAGATGGAATCCATGAGATGCTCCTACTCTCCTTGGTCATTAGATCATAATCTTTCAAGACAAAGATCACCTGATGGGTTTCCTAGCACATCCCATGCAATTTCACCTCGAAGAAATGCAGAAGAGTTGCAGAGGAGGCCATCAAACCAGACAATGGATGGTGTCAGGCAAGTTCCACGTGTAACTAGGAATGTTCTCGAGTCTACAAGGGCTACAAGGCCTCTAAGTGCTGCACCTTCCACTATGATGGCATGCTCCACAATTTCCACATTGCCTTCAGTAACGGCTAAGCCTGGGGCATCTTTTCTTGGCCAAATTCCTCCATCAAGCAGCATTGCTCAAAGGACTGCATATGTGGGCAATGAACAGCAATCCTACCAAACTGTTGATGGCCTGTTAAATGCACTGGGGCTCGCAAAATATGCAATTCTCTTCAAGGCTGAGGAAGTTGATATGACTGCATTGAAGCAGATGAGGGAAAATGACCTCAAAGAGCTTGGAATTCCAATGGGACCAAGAAAAAAGATTCTTCTTGCTCTGTTGCCTCGTGTCAAACGTCAACAATGA 1014 0.4586 MSDTSRGRVTITLGRSGQVVKRDVSATDASFSGSYASAGTKRSARDRLGNNADSSSWYGNELSSNKRHRGYIGMSNGLHDRRIGKDDLRLKLMRKSASRQSKRNIDLREKLLKAHPLSTRVNSSRLMPEPSESSMPRQTHLARSSNDLTQMESMRCSYSPWSLDHNLSRQRSPDGFPSTSHAISPRRNAEELQRRPSNQTMDGVRQVPRVTRNVLESTRATRPLSAAPSTMMACSTISTLPSVTAKPGASFLGQIPPSSSIAQRTAYVGNEQQSYQTVDGLLNALGLAKYAILFKAEEVDMTALKQMRENDLKELGIPMGPRKKILLALLPRVKRQQ 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04185 337 SUPERFAMILY SAM/Pointed domain 273 330 IPR013761 -
Aip03g04185 337 MobiDBLite consensus disorder prediction 168 200 - -
Aip03g04185 337 MobiDBLite consensus disorder prediction 31 61 - -
Aip03g04185 337 ProSiteProfiles SAM domain profile. 273 336 IPR001660 GO:0005515
Aip03g04185 337 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 336 - -
Aip03g04185 337 Gene3D - 275 337 IPR013761 -
Aip03g04185 337 PANTHER OSJNBA0060P14.15 PROTEIN 1 336 - -
Aip03g04185 337 MobiDBLite consensus disorder prediction 123 150 - -
Aip03g04185 337 SMART SAM_4 270 335 IPR001660 GO:0005515
Aip03g04185 337 Pfam SAM domain (Sterile alpha motif) 272 329 IPR001660 GO:0005515
Aip03g04185 337 MobiDBLite consensus disorder prediction 168 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04185 Aip-Chr3 125832898 125837321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04185 272 329 Glycosyltransferase AT3G07170 60.345 9.43e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04185 - - gmx:100797199 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04185 03 125832898 125837321 Aip03g04185 03 125832898 125837321 ECH