Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04183 ATGCAGGCCACTGTGATCCTAATATTCCAACCAGCTGAGGAAAGAGGCACAGGAGCAAGGGACATTATCGCCGAAAAGGTGCTGGAAGATGTAGCAGCTGTTTTTGGCCTGCACCTGGTGCCGGAGTATCCCTTAGGAGTTGTGGCGTCGCGGCCGGGAGAGTTCTTGGCCGGTTGCGGAAGCTTCAAAGCTAACATAAACGGAAGAGACGGAGCTTGCCTCGATCCTGTTTTGGCTGCTTCAACATCAGTGATTAGCTTGCAAAACATCGTTTCAAGGGAGACAGATCCTTTAGATTCTCAGGTGATTTCCGTGGCCATGGTGAATGCAGGATCTTCCCTGGACATAATCCCCGATTCAGCCACCATTGGAGGCACTTACAGAGCATTCAGCAGAAAGAGTTTCTATTGGCTAAAGAAAAGGATCGAAGAGGTAATCATAGCGCAGGCAGAAGTACACAGGTGCAGCGCGGAGGTTATTTTCAACGGCGATGAGCATCCAACAATCCCTCCGACGAGAAACGACGAGAGAATATATGAAGTGGTTAGGGAAGTTTCAGGCATGATTGTAGGAAAGGAGAAGACAGAAGTAGCACCGGTGTTCACCGGAAGTGAAGATTTCGCGTTTTACTTGGAGAAGGTACCTGGAGCTTTCGTTCTAGTTGGAATGAGAAATGATGAGAGTGGATCCATTCACCCTGCTCATAGTCCTTACTATGTCGTCGACGAAGACGCGCTTCCGATTGGTGCTGCATTGCATGCAGCATTTGCTCTCTCCTTCCATTCCTATTCAACAAATTCTTACATTTGA 810 0.484 MQATVILIFQPAEERGTGARDIIAEKVLEDVAAVFGLHLVPEYPLGVVASRPGEFLAGCGSFKANINGRDGACLDPVLAASTSVISLQNIVSRETDPLDSQVISVAMVNAGSSLDIIPDSATIGGTYRAFSRKSFYWLKKRIEEVIIAQAEVHRCSAEVIFNGDEHPTIPPTRNDERIYEVVREVSGMIVGKEKTEVAPVFTGSEDFAFYLEKVPGAFVLVGMRNDESGSIHPAHSPYYVVDEDALPIGAALHAAFALSFHSYSTNSYI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04183 269 TIGRFAM amidohydrolases: amidohydrolase 4 249 IPR017439 GO:0016787
Aip03g04183 269 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 2 2 267 - -
Aip03g04183 269 Gene3D Zn peptidases 1 115 - -
Aip03g04183 269 Gene3D Zn peptidases 124 268 - -
Aip03g04183 269 Pfam Peptidase family M20/M25/M40 3 257 IPR002933 GO:0016787
Aip03g04183 269 SUPERFAMILY Zn-dependent exopeptidases 3 260 - -
Aip03g04183 269 SUPERFAMILY Bacterial exopeptidase dimerisation domain 57 170 IPR036264 -
Aip03g04183 269 PANTHER PEPTIDASE M20 FAMILY MEMBER 2 267 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04183 Aip-Chr3 125799752 125802453 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04183 K14664 - gmx:100780711 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04183 03 125799752 125802453 Aip03g04183 03 125799752 125802453 ECH