Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04162 ATGACTGGTGTTATTGGAAAGCTTGAGGCAGAAATTGAGGTGAAGTCGAATGCAGACAAGTTCTGGAATGCTATCAGGGATTTTGCAACCATATTTCCTAAGGCCTCACCATCTGTTTACAAAAGTATTCAGATTATTCAGGGTGATGGCAAGGCTCCTGGCTCTGTCTTCAAAACAACTTTAGGTGAAGGCTATGAACTTGTGAAGACAGTCACAGAAAGAATTGAAGATGTTGATGATGCAAAGAGGATAATAATTTATAGTGTGGTTGATGGTGAACTCCTTAAGTACTTGAAGAGTTACAAGGGATATATTAGTGTAACTCCAAAGGGGAATGATAATGGAAGCATTGTGAAATGGTCGTGTGAGTATGAAAAGGCTAGTCAAGAGGCTCCTGAACCTATTTTTATCAAAGAATTTGCAACCAACGTCTTCCCGAAGGTTGATCACTATCTTCTAAGTGCATAA 468 0.3932 MTGVIGKLEAEIEVKSNADKFWNAIRDFATIFPKASPSVYKSIQIIQGDGKAPGSVFKTTLGEGYELVKTVTERIEDVDDAKRIIIYSVVDGELLKYLKSYKGYISVTPKGNDNGSIVKWSCEYEKASQEAPEPIFIKEFATNVFPKVDHYLLSA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04162 155 SUPERFAMILY Bet v1-like 4 154 - -
Aip03g04162 155 CDD Bet_v1-like 6 152 - -
Aip03g04162 155 PANTHER MLP-LIKE PROTEIN 423 6 153 - -
Aip03g04162 155 Pfam Pathogenesis-related protein Bet v 1 family 6 154 IPR000916 GO:0006952
Aip03g04162 155 PANTHER MLP-LIKE PROTEIN 423 6 153 - -
Aip03g04162 155 SMART Bet_v_1_2 3 155 IPR000916 GO:0006952
Aip03g04162 155 PRINTS Major pollen allergen Bet V1 signature 27 37 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip03g04162 155 PRINTS Major pollen allergen Bet V1 signature 52 61 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip03g04162 155 PRINTS Major pollen allergen Bet V1 signature 69 88 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip03g04162 155 PRINTS Major pollen allergen Bet V1 signature 113 129 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip03g04162 155 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip03g04162 155 Gene3D - 1 154 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04162 Aip-Chr3 125601309 125602945 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04162 - - adu:107481122 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04162 03 125601309 125602945 Aip03g04162 03 125601309 125602945 ECH