Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04150 ATGGGTAAGAATCTCTTGATTCTTCTTGGTCTCACTCTCTTGCTTCTCTTATTTGGAACCTTCTCAGTCTCAGCTGCACCATCCACTACTTCCCCTGCTAAAATTGTTACTGGTTTTCTCTCCAATGCTGTGCCAGCTTTCACCAAGTGGGTGTGGTCCCTCAAGGCAACAACAAAAACGGCGGTTTCCAGCAGGTCGATGATGAAGTTTGAGAGTGGTTACAATGTGGAGACAGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATTCTGTTGAGTTGTTGCCCAACGGGGAGCTTCTCATTCTGGATTCTTCCAACAGTAACCTTTACAGGATCTCATCTTCACTTTCTTTGTATAGCAGACCGAAGCTGGTCGCGGGCTCTGTGGAAGGTTATACTGGACATGTTGATGGAAAGCACAGGGAGGCTAGGATGAACCATCCGAAGGGGATAACGGTTGATGACCGAGGGAATATCTATGTTGCAGATACTACTAACATGGCAATTAGGAAAATTAGTGATTCAGGGGTTACTACAATTGCAGGAGGAAAATGGATTCGTGGAGGGGGCCATGTTGATGGACCAAGTGAAGAAGCTAAGTTTTCTGATGACTTTGACGTGGTTTATGTTGGTAGTAGTTGTTCCTTACTCGTCATAGACAGAGGAAACCGAGCGATCAGGGAAATTCAACTTCACTTTGATGACTGTGCCTATCAATATGGTAGCGGATTCCCACTTGGGATTGCAATGCTTGTTGGGGCCGTCTTCTTTGGTTATATGCTGGCATTGTTGCAGCGAAGACTCGGTACAATTGTTGGTTCACAGGATGATCAGGTTCAAGTGATGTCTTCCATTTCACCTAGTCCTTTTCAACAGCCCATGAAATCTGTGAGGCCTCCCTTGATTCCATCCGAATTCGAACCTGAAAAGCAAGAGGAAGGCTTCTTTGGGTCCCTTGGAAAGCTACTTGCCAATGCCTCTGCATCAATGGTGGAGATAATGGGAGGAATATTTCCTGTTTTCAGAAGAAAACCACAAAGCTACAAGTTTCAAAGACAACCTCTGGTCCCACTGCAACATCAAAAGCAAGCTTGGCCGGCACAGGAAAGTTTCGTGATTCCTGATGGAGATGAGCCTCCTTCTATCGACATGAGAACCCCAACCCCTCGAAAAACATACCCTTTCATGTCTAAAGACGCTGAGAAAATGCAGCAATTAAGGCAAAGTAGAGCATTTTACAATGGATGGGACGGTGATCTTCAGCAGCAGCAACTGCAGCAGCAGCAACAACCACAAAGACATCATCATCGTCATCAGTACCAGTCATCGACCCCTCACACTTACTTCGAGCAAAGCCGCGAGACGACCAATGAGATAGTGTTCGGGGCGGTGCAGGAACAAGATGGTAAGGAGGAGTCTGTGGTAATAAAGCCTGTGAACTATGGTGACTCGCTATATGAACATCACAATATCCGGTCTAGAGTGAATTCCATGGGTTATGCCCACAGGTATTGA 1518 0.4598 MGKNLLILLGLTLLLLLFGTFSVSAAPSTTSPAKIVTGFLSNAVPAFTKWVWSLKATTKTAVSSRSMMKFESGYNVETVFDGSKLGIEPYSVELLPNGELLILDSSNSNLYRISSSLSLYSRPKLVAGSVEGYTGHVDGKHREARMNHPKGITVDDRGNIYVADTTNMAIRKISDSGVTTIAGGKWIRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLVGAVFFGYMLALLQRRLGTIVGSQDDQVQVMSSISPSPFQQPMKSVRPPLIPSEFEPEKQEEGFFGSLGKLLANASASMVEIMGGIFPVFRRKPQSYKFQRQPLVPLQHQKQAWPAQESFVIPDGDEPPSIDMRTPTPRKTYPFMSKDAEKMQQLRQSRAFYNGWDGDLQQQQLQQQQQPQRHHHRHQYQSSTPHTYFEQSRETTNEIVFGAVQEQDGKEESVVIKPVNYGDSLYEHHNIRSRVNSMGYAHRY 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04150 505 PANTHER - 1 505 - -
Aip03g04150 505 Gene3D - 38 231 IPR011042 -
Aip03g04150 505 PANTHER NHL REPEAT PROTEIN 1 505 - -
Aip03g04150 505 MobiDBLite consensus disorder prediction 372 395 - -
Aip03g04150 505 Pfam NHL repeat 147 172 IPR001258 GO:0005515
Aip03g04150 505 SUPERFAMILY NHL repeat 75 233 - -
Aip03g04150 505 MobiDBLite consensus disorder prediction 425 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04150 Aip-Chr3 125409727 125412574 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04150 - - gmx:100781836 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04150 03 125409727 125412574 Aip03g04150 03 125409727 125412574 ECH