Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04138 ATGGACCAACAACGCGAACCTAACTCTAATTCGCAGAAGAAGCGCCGTCTCGACCTTGACTGGGAAGCTCTTCTCCCCCGCCACGGCGACGCACCGCCGCCGGAGATCGTGGTCAAGCCTATGGCCTCCGGTAATTCCTTCTCCCTCGACGATGAATTTAGATACTTAACCGACCACCAGCTCATCGAAAGCATTCGGAGCAAGAAGCAAACCTTGAGAATCCATCTCCCGAAGTTGAAGGATGGAGGTGTCAAGATTCTCGATACCATCAGGCGACAAGAGGAAGAGCTAGCTCGCCGGAAAAGGACGCCACACGTCCAGGAAGTTGTTGATGCTGATGATAAACCGAGAAATGCTACTGGCTCAAGTGATGTTGGTGTGTCTAGTGACTCGAGACAGAAGAGTATCTCATCTCAAGTGCCAGTTCAATCCCAATTTGCATCTTGTTTTTCTAAGAAATTGGAAGGAGCTGATCAGACGGATTGTATGGTGGTTGACACATCTGGAAAAGAGACTTCACAATTCAGACATTGCAATAACCAGACAATAAAAGACATGGGAGAACCTAAAAGAGGAAGGAGGCTTCGATCATCTTCTAGAAATGAGCCATTTCAATGCGCTACCAACCTTTCCAAGAATGATGCTTTTAATGATGGTAAAAAATCCAGAGCAGCTTCCAGTATCTCTACTGCGAACATTGGGAAAAGCCTGTCAAGATTCTTCGCTCCAGAAGGTCAGCCCATTGTCCTTGATGATGATGATGACGATGATGATGAACCTTATGTGCTAGAGAAGACAGAGCAAGAAAAAAAACTTGCTGAATGTGCGAAAGATGCTAAGATGTATTACCCATCAAGTGACGATCCAGAGTCTGTTGAAATTTGTTACTCAGACATAGATTGCCTTGCTCCTGAAGGCTATTTGACTTCAACTATTATGAATTTTTACATACGATATTTGAAGCAGCAAGCATCTTTGGCAAATAGATCGTTATCCAAGTATCATTTTTTTAATACATATTTCTACAAGAAGCTTCAGGAGGCTGTTTCGGTTAAGCAAAGTGACAGAGCAACATTCTTTGTCAAATTCAGAAGGTGGTGGAAGGGTGTAAATATATTTCAGAAGGCCTATGTTTTGATTCCAGTACACGAGGATCTTCATTGGAGCTTGATCATTATTTGTATCCCGGATAAAGGTGATGAATCAGGGCCAATCATACTTCATCTGGATTCTTTGAGTCTTCACTCTAGCAGATCACTATTTGATAACATCAAAAGCTTTTTGATAGAAGAAAAGAACTATTTGGATCAGGAACATATGTCATCAGATGTTTCAATTGCAGACAGGATATGGAATTGCCTTCCCCGTCGAATTGAAGCGCAAGTTATCACGGTTCCCCAACAAAGGAATGATTATGATTGTGGCCTTTTTGTATTGTACTTTATTGAACGTTTCATTGAATGGGCACCGGAAAGACTCAAAAAGAAAGATTTGGCTATGTTTGGCAAGCAGTGGTTCAAACCTTCAGAAGCATCCAATTTGAGAGTGAAAATCCGTAAACTGCTCGTGGAAGAACTTACAAATTCAATTGACCGTAATTCTTCTCCAAAGTGTTCTCCTTCATTATTTTCGGGCACAAGTCCAACTGAATGTACTGAGACAGCCAAGGACCCTGATCTAACCACCGCATGA 1692 0.4243 MDQQREPNSNSQKKRRLDLDWEALLPRHGDAPPPEIVVKPMASGNSFSLDDEFRYLTDHQLIESIRSKKQTLRIHLPKLKDGGVKILDTIRRQEEELARRKRTPHVQEVVDADDKPRNATGSSDVGVSSDSRQKSISSQVPVQSQFASCFSKKLEGADQTDCMVVDTSGKETSQFRHCNNQTIKDMGEPKRGRRLRSSSRNEPFQCATNLSKNDAFNDGKKSRAASSISTANIGKSLSRFFAPEGQPIVLDDDDDDDDEPYVLEKTEQEKKLAECAKDAKMYYPSSDDPESVEICYSDIDCLAPEGYLTSTIMNFYIRYLKQQASLANRSLSKYHFFNTYFYKKLQEAVSVKQSDRATFFVKFRRWWKGVNIFQKAYVLIPVHEDLHWSLIIICIPDKGDESGPIILHLDSLSLHSSRSLFDNIKSFLIEEKNYLDQEHMSSDVSIADRIWNCLPRRIEAQVITVPQQRNDYDCGLFVLYFIERFIEWAPERLKKKDLAMFGKQWFKPSEASNLRVKIRKLLVEELTNSIDRNSSPKCSPSLFSGTSPTECTETAKDPDLTTA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04138 563 MobiDBLite consensus disorder prediction 183 198 - -
Aip03g04138 563 ProSiteProfiles Ubiquitin-like protease family profile. 292 485 IPR003653 GO:0006508|GO:0008234
Aip03g04138 563 Gene3D - 283 523 - -
Aip03g04138 563 SUPERFAMILY Cysteine proteinases 282 525 IPR038765 -
Aip03g04138 563 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 51 532 - -
Aip03g04138 563 MobiDBLite consensus disorder prediction 98 118 - -
Aip03g04138 563 MobiDBLite consensus disorder prediction 531 563 - -
Aip03g04138 563 MobiDBLite consensus disorder prediction 183 219 - -
Aip03g04138 563 MobiDBLite consensus disorder prediction 121 139 - -
Aip03g04138 563 Pfam Ulp1 protease family, C-terminal catalytic domain 307 511 IPR003653 GO:0006508|GO:0008234
Aip03g04138 563 Gene3D - 334 462 - -
Aip03g04138 563 MobiDBLite consensus disorder prediction 98 139 - -
Aip03g04138 563 PANTHER UBIQUITIN-LIKE PROTEASE 4 51 532 - -
Aip03g04138 563 MobiDBLite consensus disorder prediction 199 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04138 Aip-Chr3 125209398 125215595 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04138 K16287 - gmx:100790705 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04138 03 125209398 125215595 Aip03g04138 03 125209398 125215595 ECH