Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04137 ATGAGGAGTTGGATGATGAGGCGCATGGGAATGGCGATACTTGTGCCACCCAACCCTATTCCTTCCATAATCCCTACCTTCCCTCGCTCTTTCACCACCCTAACTACGCCGTTTCTCACTACTTCCCGCCGCCTAACTCTTTCAGCTCCATCTTCTTCCTCTTCTTCTCATTACCACTTCTCTGATTTTGATGCAGGAGAAGGCGACTGCGTTGCAAATGCAATTCCATGGAATGGTTCTAAGGTGCTTCTTAAAGGGATGACTTATACTCAACTCCAAAAATGGGTTCAATCTCATGGATACAGACCCGGGCAGGCAATGATGTTATGGAAGCGTATGTATGGAAACGATATTTGGGCTTTTCATACTGATGAACTGGAAGGTTTGAACAAAGATTTCAAGAAGATGCTGAGTGAAAAAGCTGAGTTCAGGGCACTCTCTTTGAAAGAAATTCGCACAGCGGCTGATGGAACTAGGAAGATTTTGTTCGCATTGGATGATGGGATGGTTGTAGAAACAGTTGTCATACCTTGCGATAGAGGCAGGACCACTGTGTGTGTTTCAAGTCAAGTTGGTTGTGCCATGAATTGCCAATTTTGCTATACTGGAAGAATGGGTCTCAGGAGACACCTTACTGCTGCAGAAATAGTAGAACAGGCAGTTTTTGCCCGTCGAATGCTTACCAGTGAAGTTGGTTCCATCACTAATGTTGTCTTTATGGGAATGGGAGAACCACTACATAACATTGATAATGTCATTAAAGCTGCAGATATTATGGTGGATGAGCAAGGGCTTCAATTCAGTCCCCGCAAGGTCACTATTTCTACCAGTGGGCTTGTTCCACAGCTCAGACGTTTCCTTCATGAATCCAAGTGTGCTTTAGCTGTTAGTTTGAATGCCACTACTGATGAGGTGAGAAATTGGATCATGCCTATAAATCGGAAGTATAAGTTGGACTTGCTTCTGGGTACTCTTCGGGAGGAGCTTTGCTCGAAACGCAACTATAAAGTTCTTTTTGAGTATGTGATGCTTGAAGGAATTAATGACAGTGATGACGATGCAAAGAGGCTAATTGAGCTTGTGAAGGGAATTCCATGCAAGATCAATCTCATCTCATTCAACCCGCATAGTGGATCATTCTTCAGACCAACAAAAGAGGAGAGGATGATTGAGTTCCGGAACACATTGGCCGGTGGAGGGTGCACAGTCTTCTTGCGGCTCAGTCGTGGCGACGATCAGATGGCTGCCTGTGGTCACGAAGCAAAGGGAAAGGAAATTGATATTTTGCTCGGGGAGTTGTGGTGCACGCGCTTCATCTTGAGAACCCGCACTCTTTCTCTGGTTCTCCATTTCTCCCCTTTGCAGTTACACAATCAGCATTCAATGGCTGCTCCTGCAAACGACGTCGTCGCTGTTGAAAGGACATTGCTCAAGCACGTTCGCGACAACGTCCATGGCAATATTTTCCTCGAGCCGATTTTCTTGAAATTTGTTGACACCGAACAATTTCAGAGACTTCGTGATTTGAAGCAGCTAGGTCTAACTCATATGGTTTACCCTGGAGCTGTACACACTCGTTTTGAGCATTCACTTGGTGTTTATTGGCTTGCCGGCAAAGCTATTGACATAATAAAAAAATACCAAGGCCCAGAGCTTGGTATTGAACATTGTGATGTGATGGCAGTAAAGCTTGCTGGATTACTGCATGATGTTGGCCATGGTCCCTTCAGCCACATGTTTGAGGGCAAGTTCCTTCCCCGGGTCTCTAATGGTGACAAATGGTCCCATGAGAAAATGTCAGCGAAGATGATAGATTACATGGTTGATGAACACAATATTGATATTGATCCTGAACTCCTCAAGAAAGTGAAGGAAATGATCACTTCAAGCTGTGGCAATCCTACACAAAATGCAAAGGGAAACCAGTTCTTGTATGATATTGTGGCAAATGGTCGCAATGGAATTGATGTTGATAAGTTTGACTACATTGTTCGTGATTGTCGTGCTTGTGGCCTAGGTTGCAACTTTCAGCCTGAAAGATTGATGGAGACAATGCAAGTCATTGACGATGAAATATGTTATCGTGCCAAAGATTATCTGACAATTCACAAGTTATTTGCAACGCGGGCTGATTTGCATCGAACTGTCTATACACATGCAAAAGTACAAGCAATAGAATTGATGGTCATAGATGCGCTGGTGAAAGCAAACCCATATCTTGATATTGCCTCCTCAATTCATCAACCATCTGAATTTTGGAAGTTAGATGACTCGATTCTTAAAGCAATTGAGATTTCTCCTCGAGAAGAGCTCAAGGAATCCCAAGACTTGATCCGACGCATTCGCAGAAGAGATATATACCAGTTCTGCAATGAGTTTTCAGTACCAAAGGACAGACTTGACCACTTCAGAAACATCACACCCCAGGATATTGTTTGTTCCCAGACAAATGGCATAAATTTGAAGGAAGATGATGTTGCTGTGAGCAATGTTAAAATTGATTTGACATACGGAACAGAAAACCCTCTCGAAAGAATTAAATTCTTCAAGGATTACGAGAGCAAAGAAAAGTTCCCAATCCCAGACTATCGCATCAGTCATTTGTTGCCAGCTTTCAACAAAGACATCATAGTGAGGGTATACAGTAAGAAGCCTGAACTGGTTGGTGCTGTTTCTGCTGCCTTTGAAAATTATCAGTACAAGATATTTGGAAGAAAAGCGCAAGTGCACGAAACTCCTGAGAAGAAGAAACGCGGAAGATGCCATCAGTTGCATGTCTAA 2781 0.434 MRSWMMRRMGMAILVPPNPIPSIIPTFPRSFTTLTTPFLTTSRRLTLSAPSSSSSSHYHFSDFDAGEGDCVANAIPWNGSKVLLKGMTYTQLQKWVQSHGYRPGQAMMLWKRMYGNDIWAFHTDELEGLNKDFKKMLSEKAEFRALSLKEIRTAADGTRKILFALDDGMVVETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLRRHLTAAEIVEQAVFARRMLTSEVGSITNVVFMGMGEPLHNIDNVIKAADIMVDEQGLQFSPRKVTISTSGLVPQLRRFLHESKCALAVSLNATTDEVRNWIMPINRKYKLDLLLGTLREELCSKRNYKVLFEYVMLEGINDSDDDAKRLIELVKGIPCKINLISFNPHSGSFFRPTKEERMIEFRNTLAGGGCTVFLRLSRGDDQMAACGHEAKGKEIDILLGELWCTRFILRTRTLSLVLHFSPLQLHNQHSMAAPANDVVAVERTLLKHVRDNVHGNIFLEPIFLKFVDTEQFQRLRDLKQLGLTHMVYPGAVHTRFEHSLGVYWLAGKAIDIIKKYQGPELGIEHCDVMAVKLAGLLHDVGHGPFSHMFEGKFLPRVSNGDKWSHEKMSAKMIDYMVDEHNIDIDPELLKKVKEMITSSCGNPTQNAKGNQFLYDIVANGRNGIDVDKFDYIVRDCRACGLGCNFQPERLMETMQVIDDEICYRAKDYLTIHKLFATRADLHRTVYTHAKVQAIELMVIDALVKANPYLDIASSIHQPSEFWKLDDSILKAIEISPREELKESQDLIRRIRRRDIYQFCNEFSVPKDRLDHFRNITPQDIVCSQTNGINLKEDDVAVSNVKIDLTYGTENPLERIKFFKDYESKEKFPIPDYRISHLLPAFNKDIIVRVYSKKPELVGAVSAAFENYQYKIFGRKAQVHETPEKKKRGRCHQLHV 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04137 926 Pfam HD domain 526 663 IPR006674 -
Aip03g04137 926 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 467 918 - -
Aip03g04137 926 TIGRFAM rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 83 424 IPR027492 GO:0030488|GO:0070475
Aip03g04137 926 Gene3D - 786 903 - -
Aip03g04137 926 SFLD adenosine C2 methyltransferase (RlmN-like) 81 419 IPR004383 GO:0006364|GO:0008173
Aip03g04137 926 SUPERFAMILY Radical SAM enzymes 181 397 - -
Aip03g04137 926 SUPERFAMILY HD-domain/PDEase-like 476 904 - -
Aip03g04137 926 ProSiteProfiles HD domain profile. 526 663 IPR006674 -
Aip03g04137 926 SMART hd_13 522 672 IPR003607 -
Aip03g04137 926 CDD Radical_SAM 192 392 - -
Aip03g04137 926 Gene3D Aldolase class I 146 425 IPR013785 -
Aip03g04137 926 Gene3D Hypothetical protein af1432 476 785 - -
Aip03g04137 926 Gene3D - 81 144 - -
Aip03g04137 926 ProSiteProfiles Radical SAM core domain profile. 179 412 IPR007197 GO:0003824|GO:0051536
Aip03g04137 926 PANTHER DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE 467 918 - -
Aip03g04137 926 Pfam 4Fe-4S single cluster domain 192 287 - -
Aip03g04137 926 SFLD methyltransferase (Class A) 81 419 - -
Aip03g04137 926 CDD HDc 524 671 IPR003607 -
Aip03g04137 926 Pfam Radical SAM superfamily 188 354 IPR007197 GO:0003824|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04137 Aip-Chr3 125194608 125204503 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04137 K22544 - gmx:100796869 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04137 03 125194608 125204503 Aip03g04137 03 125194608 125204503 ECH